BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZH09RM1.SCF screened BAC_end (979 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1735 1485 0.0 >3x_Contig1735 Length = 19486 Score = 1485 bits (749), Expect = 0.0 Identities = 839/861 (97%), Gaps = 6/861 (0%) Strand = Plus / Minus Query: 50 ttgagtttgaaggaccgataggaacatacgtattggagccagggtttggaaggctaatga 109 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 9818 ttgagtttgaaggaccgataggaacatacgtattggagccagggtttggaaggctaa-ga 9760 Query: 110 tcatcatcggaatcaccatcaaagtttataccagatactccagttaatcctgctgctcct 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9759 tcatcatcggaatcaccatcaaagtttataccagatactccagttaatcctgctgctcct 9700 Query: 170 tcgcgggaacctgagcccgtaactcctagtgaattcgagtacgatcccaagtttggaccc 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9699 tcgcgggaacctgagcccgtaactcctagtgaattcgagtacgatcccaagtttggaccc 9640 Query: 230 tgcatgggattacgcgcagctgcagccggtgcagccggcccaggattatgagaaacgtag 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9639 tgcatgggattacgcgcagctgcagccggtgcagccggcccaggattatgagaaacgtag 9580 Query: 290 tcatgttgctgtctatgatcatacaacttagtatgctcttcagttttcaatgacgccaaa 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9579 tcatgttgctgtctatgatcatacaacttagtatgctcttcagttttcaatgacgccaaa 9520 Query: 350 gaatgtgctgctgaagtagtacgagaaatctcgtgttctccggaatcaactgatttatca 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9519 gaatgtgctgctgaagtagtacgagaaatctcgtgttctccggaatcaactgatttatca 9460 Query: 410 tcagacatctctgattatttcgacgcttgccctgttaggcttaacagtataataaataaa 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9459 tcagacatctctgattatttcgacgcttgccctgttaggcttaacagtataataaataaa 9400 Query: 470 aaacgtattcgtagtgggaacgttgaacttttcaatcgtgtaaccttgagtcttatcgtt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9399 aaacgtattcgtagtgggaacgttgaacttttcaatcgtgtaaccttgagtcttatcgtt 9340 Query: 530 ttagcttacaaatagacaggctaggttatactatcactatagtgagaaacgatttaagtt 589 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9339 ttagcttacaaatagacaggctaggttatactatcactatagtgagaaacgatttaggtt 9280 Query: 590 gaaactgccaaatgcttaacaaaacgggccttttgaggcagctaagttcgtcacaactaa 649 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9279 gaaactgccaaatgcttaacaaaacgggccttttgaggcagctaagttcgtcacaactaa 9220 Query: 650 aacagcaaagaaaggtgacagctaaatcttgactatcacacacttcatatggttaaatgt 709 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9219 aacagcaaagaagggtgacagctaaatcttgactatcacacacttcatatggttaaatgt 9160 Query: 710 ttgaagatttatgtatttcttctaacgccaaactattccgtgaatgcgtttctaagatgg 769 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9159 ttgaagaattatgtatttcttctaacgccaaactattccgtgaatgcgtttctaagatgg 9100 Query: 770 gaaagatggactcttcttt-caccaacctttccatcattatatcttatctcatcctacat 828 ||||||| |||||||||| ||||||||||||||||||||||||| |||||||| |||| Sbjct: 9099 taaagatgtactcttctttacaccaacctttccatcattatatctcatctcatctaacat 9040 Query: 829 ttcttattttcaaggaa-cggtcaaaaag-ccaattttttattac-aaactttcc-cacg 884 ||||||||||||| ||| ||||||||| | | |||||| || ||| ||||||||| |||| Sbjct: 9039 ttcttattttcaaagaaccggtcaaaatgtcaaattttctagtacaaaactttccacacg 8980 Query: 885 tggttgagggaaagaataatg 905 || |||||| |||||||||| Sbjct: 8979 tgtttgaggagaagaataatg 8959 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6366 Number of Sequences: 1807 Number of extensions: 6366 Number of successful extensions: 34 Number of sequences better than 1.0e-20: 1 length of query: 979 length of database: 10,358,551 effective HSP length: 16 effective length of query: 963 effective length of database: 10,329,639 effective search space: 9947442357 effective search space used: 9947442357 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)