BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZH11FM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1680 1558 0.0 >3x_Contig1680 Length = 12597 Score = 1558 bits (786), Expect = 0.0 Identities = 835/846 (98%), Gaps = 4/846 (0%) Strand = Plus / Plus Query: 87 cagtaactcggcttttgcagttactatgtcgtcatagtttagagcgcttattgcatactt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6810 cagtaactcggcttttgcagttactatgtcgtcatagtttagagcgcttattgcatactt 6869 Query: 147 agcacttcgttgtgctttttgaatcctgtgctcccttgacattatttctttcaaagtagc 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6870 agcacttcgttgtgctttttgaatcctgtgctcccttgacattatttctttcaaagtagc 6929 Query: 207 aacatcatgtctcactgccggtttaggtgattctaatttgatcggttctggcgttagcaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6930 aacatcatgtctcactgccggtttaggtgattctaatttgatcggttctggcgttagcaa 6989 Query: 267 ctttattggaacttctggcgactcaagctgctttaacttctcaacggattcatctacctt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6990 ctttattggaacttctggcgactcaagctgctttaacttctcaacggattcatctacctt 7049 Query: 327 caaagagggagacggaccatgctgctgtgctatttccgaatcttttggctcttcgaatag 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7050 caaagagggagacggaccatgctgctgtgctatttccgaatcttttggctcttcgaatag 7109 Query: 387 cggctgatcctctagatcctcgacaaaatttgggatttcatcttccacttcgcttagtgg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7110 cggctgatcctctagatcctcgacaaaatttgggatttcatcttccacttcgcttagtgg 7169 Query: 447 gttactatttgtaggttctgatgtggtttcttggggcttcttgtcgctttgtaattgtcc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7170 gttactatttgtaggttctgatgtggtttcttggggcttcttgtcgctttgtaattgtcc 7229 Query: 507 ccttttcaatttcataagatagtatttggaatgtttgatccttttatcgcattgctcttt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7230 ccttttcaatttcataagatagtatttggaatgtttgatccttttatcgcattgctcttt 7289 Query: 567 tacaatggcatccatactatccgcccatatatgtttacagcattgaaacaaatctataca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7290 tacaatggcatccatactatccgcccatatatgtttacagcattgaaacaaatctataca 7349 Query: 627 gcaccatagcccctttcctatatcgtcattaatcctatcatcttgtatttgtactaagat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7350 gcaccatagcccctttcctatatcgtcattaatcctatcatcttgtatttgtactaagat 7409 Query: 687 tccgttatagattgacatcgcaagatttaacacaaaagccaatgctttgtctttttcatt 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7410 tccgttatagattgacatcgcaagatttaacacaaaagccaatgctttgtctttttcatt 7469 Query: 747 caacaggatcttagtaccttcatcattcacctcatttttaaagctctctacatcgtctaa 806 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7470 caacaggatcttagtaccttcatcattcacctcatttttaaagctctctacatcgtctaa 7529 Query: 807 tattgacatgaccaactctgtcgcttccccgtctcgctcctttctcattc-atattagct 865 || ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| Sbjct: 7530 taatgacatgaccaactctgtcgcttccccgtctcgctcc-ttctcattcaatattagct 7588 Query: 866 ctgccgcatatatgtttaagtaggaaagat-ttacaagaagagttgacatttctttagag 924 |||||||||||| |||||||| | ||||| | ||| |||||||||||| |||||||||| Sbjct: 7589 ctgccgcatatagttttaagta-gtaagatataacaggaagagttgacaattctttagag 7647 Query: 925 agttta 930 |||||| Sbjct: 7648 agttta 7653 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6065 Number of Sequences: 1807 Number of extensions: 6065 Number of successful extensions: 28 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)