BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZH11FM1.SCF screened BAC_end
         (933 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1680                                                        1558   0.0  

>3x_Contig1680 
          Length = 12597

 Score = 1558 bits (786), Expect = 0.0
 Identities = 835/846 (98%), Gaps = 4/846 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   cagtaactcggcttttgcagttactatgtcgtcatagtttagagcgcttattgcatactt 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6810 cagtaactcggcttttgcagttactatgtcgtcatagtttagagcgcttattgcatactt 6869

                                                                        
Query: 147  agcacttcgttgtgctttttgaatcctgtgctcccttgacattatttctttcaaagtagc 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6870 agcacttcgttgtgctttttgaatcctgtgctcccttgacattatttctttcaaagtagc 6929

                                                                        
Query: 207  aacatcatgtctcactgccggtttaggtgattctaatttgatcggttctggcgttagcaa 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6930 aacatcatgtctcactgccggtttaggtgattctaatttgatcggttctggcgttagcaa 6989

                                                                        
Query: 267  ctttattggaacttctggcgactcaagctgctttaacttctcaacggattcatctacctt 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6990 ctttattggaacttctggcgactcaagctgctttaacttctcaacggattcatctacctt 7049

                                                                        
Query: 327  caaagagggagacggaccatgctgctgtgctatttccgaatcttttggctcttcgaatag 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7050 caaagagggagacggaccatgctgctgtgctatttccgaatcttttggctcttcgaatag 7109

                                                                        
Query: 387  cggctgatcctctagatcctcgacaaaatttgggatttcatcttccacttcgcttagtgg 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7110 cggctgatcctctagatcctcgacaaaatttgggatttcatcttccacttcgcttagtgg 7169

                                                                        
Query: 447  gttactatttgtaggttctgatgtggtttcttggggcttcttgtcgctttgtaattgtcc 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7170 gttactatttgtaggttctgatgtggtttcttggggcttcttgtcgctttgtaattgtcc 7229

                                                                        
Query: 507  ccttttcaatttcataagatagtatttggaatgtttgatccttttatcgcattgctcttt 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7230 ccttttcaatttcataagatagtatttggaatgtttgatccttttatcgcattgctcttt 7289

                                                                        
Query: 567  tacaatggcatccatactatccgcccatatatgtttacagcattgaaacaaatctataca 626
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7290 tacaatggcatccatactatccgcccatatatgtttacagcattgaaacaaatctataca 7349

                                                                        
Query: 627  gcaccatagcccctttcctatatcgtcattaatcctatcatcttgtatttgtactaagat 686
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7350 gcaccatagcccctttcctatatcgtcattaatcctatcatcttgtatttgtactaagat 7409

                                                                        
Query: 687  tccgttatagattgacatcgcaagatttaacacaaaagccaatgctttgtctttttcatt 746
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7410 tccgttatagattgacatcgcaagatttaacacaaaagccaatgctttgtctttttcatt 7469

                                                                        
Query: 747  caacaggatcttagtaccttcatcattcacctcatttttaaagctctctacatcgtctaa 806
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7470 caacaggatcttagtaccttcatcattcacctcatttttaaagctctctacatcgtctaa 7529

                                                                        
Query: 807  tattgacatgaccaactctgtcgcttccccgtctcgctcctttctcattc-atattagct 865
            || ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct: 7530 taatgacatgaccaactctgtcgcttccccgtctcgctcc-ttctcattcaatattagct 7588

                                                                        
Query: 866  ctgccgcatatatgtttaagtaggaaagat-ttacaagaagagttgacatttctttagag 924
            ||||||||||||  |||||||| | ||||| | ||| |||||||||||| ||||||||||
Sbjct: 7589 ctgccgcatatagttttaagta-gtaagatataacaggaagagttgacaattctttagag 7647

                  
Query: 925  agttta 930
            ||||||
Sbjct: 7648 agttta 7653


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6065
Number of Sequences: 1807
Number of extensions: 6065
Number of successful extensions: 28
Number of sequences better than 1.0e-20: 1
length of query: 933
length of database: 10,358,551
effective HSP length: 16
effective length of query: 917
effective length of database: 10,329,639
effective search space: 9472278963
effective search space used: 9472278963
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)