BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC38ZH12FM1.SCF screened BAC_end
         (996 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1584                                                        1427   0.0  

>3x_Contig1584 
          Length = 9710

 Score = 1427 bits (720), Expect = 0.0
 Identities = 855/888 (96%), Gaps = 9/888 (1%)
 Strand = Plus / Plus

                                                                        
Query: 89   acccaataacccaactatatctccggctgctccaatgtccccgttgacaaaactggatga 148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3123 acccaataacccaactatatctccggctgctccaatgtccccgttgacaaaactggatga 3182

                                                                        
Query: 149  ttctcaggcaagaggtaatgcggactccaagtcagtaggtcctaacggtggtattgtaaa 208
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3183 ttctcaggcaagaggtaatgcggactccaagtcagtaggtcctaacggtggtattgtaaa 3242

                                                                        
Query: 209  cagcaatgccacaagcatgtccaaatcaaatacacaagaatctcaggcctcaagtgatac 268
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3243 cagcaatgccacaagcatgtccaaatcaaatacacaagaatctcaggcctcaagtgatac 3302

                                                                        
Query: 269  ggaactgtcacgtatcggtaccattgccagtatgatagatttttctacaaacacaaattt 328
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3303 ggaactgtcacgtatcggtaccattgccagtatgatagatttttctacaaacacaaattt 3362

                                                                        
Query: 329  gaatctaatcgatttgaaattgtttcaccattattgcacaaacgtttggccgaccataac 388
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3363 gaatctaatcgatttgaaattgtttcaccattattgcacaaacgtttggccgaccataac 3422

                                                                        
Query: 389  tgctgctggaatcagtgagaagaaaatatggtccgtcgacgtgcctgagatagcgtttga 448
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3423 tgctgctggaatcagtgagaagaaaatatggtccgtcgacgtgcctgagatagcgtttga 3482

                                                                        
Query: 449  atacccatttttaatgcatgccttgttagcgtttagcgcaactcatttttctcgtaccga 508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3483 atacccatttttaatgcatgccttgttagcgtttagcgcaactcatttttctcgtaccga 3542

                                                                        
Query: 509  gagtggtttggaaagatatgtaacacagcatatgttggaagcacttcgattattgagaga 568
            |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 3543 gagtggtttggaaagatatgtaacacagcataggttggaagcacttcgattattgagaga 3602

                                                                        
Query: 569  agcagtacttgaaattaacgaatccaatacagatgccctagttgcaagcgccattatcct 628
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3603 agcagtacttgaaattaacgaatccaatacagatgccctagttgcaagcgccattatcct 3662

                                                                        
Query: 629  aataatggatttcctagctaacgcagccacgcctaccgccagtggagtcaacagcccttt 688
            ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3663 aataatggattccttagctaacgcagccacgcctaccgccagtggagtcaacagcccttt 3722

                                                                        
Query: 689  gaatagtggatctattttcacaagcgcttggatttttcacgttaaatgtgcagcatcatt 748
            |||||||||||||||||  ||||||||||||||||| ||||||||| |||||||| || |
Sbjct: 3723 gaatagtggatctatttcaacaagcgcttggattttccacgttaaaggtgcagcaacaat 3782

                                                                        
Query: 749  tctaactgctgtatggccgctaactgagaagtcaaagtttttataacctgatcaacgtcg 808
            ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 3783 tctaactgctgtatggccgctaactgagaagtc-aaggttttataacctgatcaacgtcg 3841

                                                                        
Query: 809  acttaagtgacttttggagattgtatcaaccaagaaaacggatctttagcagtacttgta 868
            ||||||||||| || ||||||   ||||||||||||||||||||| |||||| |||||||
Sbjct: 3842 acttaagtgac-ttaggagatgtaatcaaccaagaaaacggatctatagcagaacttgta 3900

                                                                        
Query: 869  tgtctttgacaaaaacatcgcagatttattacccgtggaagctcaattaacccgtatttg 928
            || ||||||| ||| ||||||||||||||  ||||||| ||||||||| | |||||||||
Sbjct: 3901 tg-ctttgacgaaagcatcgcagatttataccccgtgg-agctcaattca-ccgtatttg 3957

                                                            
Query: 929  tatcacactcggcctattttgattaagctttaccaaggaaaaaggcca 976
             ||||||||| |||||| | || ||||| ||| |||||||||||||||
Sbjct: 3958 -atcacactc-gcctatctcga-taagc-ttaacaaggaaaaaggcca 4001


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5806
Number of Sequences: 1807
Number of extensions: 5806
Number of successful extensions: 35
Number of sequences better than 1.0e-20: 1
length of query: 996
length of database: 10,358,551
effective HSP length: 16
effective length of query: 980
effective length of database: 10,329,639
effective search space: 10123046220
effective search space used: 10123046220
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)