BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC38ZH12FM1.SCF screened BAC_end (996 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1584 1427 0.0 >3x_Contig1584 Length = 9710 Score = 1427 bits (720), Expect = 0.0 Identities = 855/888 (96%), Gaps = 9/888 (1%) Strand = Plus / Plus Query: 89 acccaataacccaactatatctccggctgctccaatgtccccgttgacaaaactggatga 148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3123 acccaataacccaactatatctccggctgctccaatgtccccgttgacaaaactggatga 3182 Query: 149 ttctcaggcaagaggtaatgcggactccaagtcagtaggtcctaacggtggtattgtaaa 208 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3183 ttctcaggcaagaggtaatgcggactccaagtcagtaggtcctaacggtggtattgtaaa 3242 Query: 209 cagcaatgccacaagcatgtccaaatcaaatacacaagaatctcaggcctcaagtgatac 268 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3243 cagcaatgccacaagcatgtccaaatcaaatacacaagaatctcaggcctcaagtgatac 3302 Query: 269 ggaactgtcacgtatcggtaccattgccagtatgatagatttttctacaaacacaaattt 328 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3303 ggaactgtcacgtatcggtaccattgccagtatgatagatttttctacaaacacaaattt 3362 Query: 329 gaatctaatcgatttgaaattgtttcaccattattgcacaaacgtttggccgaccataac 388 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3363 gaatctaatcgatttgaaattgtttcaccattattgcacaaacgtttggccgaccataac 3422 Query: 389 tgctgctggaatcagtgagaagaaaatatggtccgtcgacgtgcctgagatagcgtttga 448 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3423 tgctgctggaatcagtgagaagaaaatatggtccgtcgacgtgcctgagatagcgtttga 3482 Query: 449 atacccatttttaatgcatgccttgttagcgtttagcgcaactcatttttctcgtaccga 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3483 atacccatttttaatgcatgccttgttagcgtttagcgcaactcatttttctcgtaccga 3542 Query: 509 gagtggtttggaaagatatgtaacacagcatatgttggaagcacttcgattattgagaga 568 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3543 gagtggtttggaaagatatgtaacacagcataggttggaagcacttcgattattgagaga 3602 Query: 569 agcagtacttgaaattaacgaatccaatacagatgccctagttgcaagcgccattatcct 628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3603 agcagtacttgaaattaacgaatccaatacagatgccctagttgcaagcgccattatcct 3662 Query: 629 aataatggatttcctagctaacgcagccacgcctaccgccagtggagtcaacagcccttt 688 ||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3663 aataatggattccttagctaacgcagccacgcctaccgccagtggagtcaacagcccttt 3722 Query: 689 gaatagtggatctattttcacaagcgcttggatttttcacgttaaatgtgcagcatcatt 748 ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| || | Sbjct: 3723 gaatagtggatctatttcaacaagcgcttggattttccacgttaaaggtgcagcaacaat 3782 Query: 749 tctaactgctgtatggccgctaactgagaagtcaaagtttttataacctgatcaacgtcg 808 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 3783 tctaactgctgtatggccgctaactgagaagtc-aaggttttataacctgatcaacgtcg 3841 Query: 809 acttaagtgacttttggagattgtatcaaccaagaaaacggatctttagcagtacttgta 868 ||||||||||| || |||||| ||||||||||||||||||||| |||||| ||||||| Sbjct: 3842 acttaagtgac-ttaggagatgtaatcaaccaagaaaacggatctatagcagaacttgta 3900 Query: 869 tgtctttgacaaaaacatcgcagatttattacccgtggaagctcaattaacccgtatttg 928 || ||||||| ||| |||||||||||||| ||||||| ||||||||| | ||||||||| Sbjct: 3901 tg-ctttgacgaaagcatcgcagatttataccccgtgg-agctcaattca-ccgtatttg 3957 Query: 929 tatcacactcggcctattttgattaagctttaccaaggaaaaaggcca 976 ||||||||| |||||| | || ||||| ||| ||||||||||||||| Sbjct: 3958 -atcacactc-gcctatctcga-taagc-ttaacaaggaaaaaggcca 4001 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5806 Number of Sequences: 1807 Number of extensions: 5806 Number of successful extensions: 35 Number of sequences better than 1.0e-20: 1 length of query: 996 length of database: 10,358,551 effective HSP length: 16 effective length of query: 980 effective length of database: 10,329,639 effective search space: 10123046220 effective search space used: 10123046220 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)