BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZA03RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1724 1332 0.0 >3x_Contig1724 Length = 20938 Score = 1332 bits (672), Expect = 0.0 Identities = 820/856 (95%), Gaps = 10/856 (1%) Strand = Plus / Plus Query: 45 cttcctgcgaaagtcaatttttatgttgagaggtatcgagccagaaaaattttcgaatta 104 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 8704 cttcctgcgaaagtcaattttcatgttgagaggtatcgagccagaaaaattttcgaatta 8763 Query: 105 aacagagtcacgtgacaataacggggaaatacataggtatggagtcagttgcataacacg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8764 aacagagtcacgtgacaataacggggaaatacataggtatggagtcagttgcataacacg 8823 Query: 165 ctaaaaaaggatagtatactcatatgagtagtaggattgacgtttttcttattttatggg 224 ||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||| Sbjct: 8824 ctaaaaaaggatagtatactcatatgagtagtaggattgacgtttttcttaattcaaggg 8883 Query: 225 ctgattttctggatgttactgtacgtaatctttttttttgtatatactcttattcgggta 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8884 ctgattttctggatgttactgtacgtaatctttttttttgtatatactcttattcgggta 8943 Query: 285 ttttgtgatggaatattatattaaagcggaacttcgttatatcagctgcctgacataggc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8944 ttttgtgatggaatattatattaaagcggaacttcgttatatcagctgcctgacataggc 9003 Query: 345 atcacttcttttccaaaagagatgtcgtgttcttgaagtttacagacccattatcaattt 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9004 atcacttcttttccaaaagagatgtcgtgttcttgaagtttacagacccattatcaattt 9063 Query: 405 tggcaaagcttagataattttttgctggtttaagagatagtgtagatgtgggccatgttt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9064 tggcaaagcttagataattttttgctggtttaagagatagtgtagatgtgggccatgttt 9123 Query: 465 gagcagacgatttggcatcggtctgaacgagaactgttcttggtcccttaaccctgacga 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9124 gagcagacgatttggcatcggtctgaacgagaactgttcttggtcccttaaccctgacga 9183 Query: 525 aatcggtattgctcatcgtgtgccaacgtgtcttcaaaaactctaaagttgtgttaacag 584 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9184 aatcggtattgctcatcgtgtgccaacgtgtcttcaaaaactctaaggttgtgttaacag 9243 Query: 585 ttttcatgaaagcaattttgtcctcgttattgtgtatcgtttctgggtgtgaatcagatt 644 |||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 9244 ttttcatgaaggcaattttgtcctcgttattgtgtatcgtttctggttgtgaatcagatt 9303 Query: 645 c-agcgattttgaggtctgttc-aaagtgacagcctgcttaaaatctaatttgttcaaac 702 | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9304 caagcgattttgaggtctgttcaaaagtgacagcctgcttaaaatctaatttgttcaaac 9363 Query: 703 cattgaaagctagaaatctgtccttttggattataatttggatcatcttcggattttaac 762 ||||||| ||||||| ||||| |||||| | |||||||| |||||||||| ||||||||| Sbjct: 9364 cattgaaggctagaattctgttcttttgtaatataattt-gatcatcttctgattttaac 9422 Query: 763 tctagtttatagaacgatcccattccaatttaacaaaaacgtta-cacgttcccgacagt 821 ||||||||||||| ||| ||||||| ||||||| ||||||||| |||| |||||||||| Sbjct: 9423 tctagtttatagacagat-ccattcccatttaac-aaaacgttaccacg-tcccgacagt 9479 Query: 822 ttccccgtacttccggagaaccggcaaccttatttcgaattccatctgaaaaagttaaac 881 || |||||| ||| |||||||| | |||||| ||||| ||||||||||| |||| ||| Sbjct: 9480 tt-cccgtagctcctgagaaccgtc-acctta-ttcgatatccatctgaaatagtttaac 9536 Query: 882 cattggtgggaccatt 897 |||| |||| |||||| Sbjct: 9537 catttgtggaaccatt 9552 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7612 Number of Sequences: 1807 Number of extensions: 7612 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)