BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC39ZA03RM1.SCF screened BAC_end
         (913 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1724                                                        1332   0.0  

>3x_Contig1724 
          Length = 20938

 Score = 1332 bits (672), Expect = 0.0
 Identities = 820/856 (95%), Gaps = 10/856 (1%)
 Strand = Plus / Plus

                                                                        
Query: 45   cttcctgcgaaagtcaatttttatgttgagaggtatcgagccagaaaaattttcgaatta 104
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 8704 cttcctgcgaaagtcaattttcatgttgagaggtatcgagccagaaaaattttcgaatta 8763

                                                                        
Query: 105  aacagagtcacgtgacaataacggggaaatacataggtatggagtcagttgcataacacg 164
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8764 aacagagtcacgtgacaataacggggaaatacataggtatggagtcagttgcataacacg 8823

                                                                        
Query: 165  ctaaaaaaggatagtatactcatatgagtagtaggattgacgtttttcttattttatggg 224
            ||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||
Sbjct: 8824 ctaaaaaaggatagtatactcatatgagtagtaggattgacgtttttcttaattcaaggg 8883

                                                                        
Query: 225  ctgattttctggatgttactgtacgtaatctttttttttgtatatactcttattcgggta 284
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8884 ctgattttctggatgttactgtacgtaatctttttttttgtatatactcttattcgggta 8943

                                                                        
Query: 285  ttttgtgatggaatattatattaaagcggaacttcgttatatcagctgcctgacataggc 344
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8944 ttttgtgatggaatattatattaaagcggaacttcgttatatcagctgcctgacataggc 9003

                                                                        
Query: 345  atcacttcttttccaaaagagatgtcgtgttcttgaagtttacagacccattatcaattt 404
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9004 atcacttcttttccaaaagagatgtcgtgttcttgaagtttacagacccattatcaattt 9063

                                                                        
Query: 405  tggcaaagcttagataattttttgctggtttaagagatagtgtagatgtgggccatgttt 464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9064 tggcaaagcttagataattttttgctggtttaagagatagtgtagatgtgggccatgttt 9123

                                                                        
Query: 465  gagcagacgatttggcatcggtctgaacgagaactgttcttggtcccttaaccctgacga 524
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9124 gagcagacgatttggcatcggtctgaacgagaactgttcttggtcccttaaccctgacga 9183

                                                                        
Query: 525  aatcggtattgctcatcgtgtgccaacgtgtcttcaaaaactctaaagttgtgttaacag 584
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9184 aatcggtattgctcatcgtgtgccaacgtgtcttcaaaaactctaaggttgtgttaacag 9243

                                                                        
Query: 585  ttttcatgaaagcaattttgtcctcgttattgtgtatcgtttctgggtgtgaatcagatt 644
            |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 9244 ttttcatgaaggcaattttgtcctcgttattgtgtatcgtttctggttgtgaatcagatt 9303

                                                                        
Query: 645  c-agcgattttgaggtctgttc-aaagtgacagcctgcttaaaatctaatttgttcaaac 702
            | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 9304 caagcgattttgaggtctgttcaaaagtgacagcctgcttaaaatctaatttgttcaaac 9363

                                                                        
Query: 703  cattgaaagctagaaatctgtccttttggattataatttggatcatcttcggattttaac 762
            ||||||| ||||||| ||||| |||||| | |||||||| |||||||||| |||||||||
Sbjct: 9364 cattgaaggctagaattctgttcttttgtaatataattt-gatcatcttctgattttaac 9422

                                                                        
Query: 763  tctagtttatagaacgatcccattccaatttaacaaaaacgtta-cacgttcccgacagt 821
            |||||||||||||  ||| ||||||| ||||||| ||||||||| |||| ||||||||||
Sbjct: 9423 tctagtttatagacagat-ccattcccatttaac-aaaacgttaccacg-tcccgacagt 9479

                                                                        
Query: 822  ttccccgtacttccggagaaccggcaaccttatttcgaattccatctgaaaaagttaaac 881
            || ||||||  ||| |||||||| | |||||| |||||  ||||||||||| |||| |||
Sbjct: 9480 tt-cccgtagctcctgagaaccgtc-acctta-ttcgatatccatctgaaatagtttaac 9536

                            
Query: 882  cattggtgggaccatt 897
            |||| |||| ||||||
Sbjct: 9537 catttgtggaaccatt 9552


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7612
Number of Sequences: 1807
Number of extensions: 7612
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 913
length of database: 10,358,551
effective HSP length: 16
effective length of query: 897
effective length of database: 10,329,639
effective search space: 9265686183
effective search space used: 9265686183
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)