BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZA05RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1700 1011 0.0 >3x_Contig1700 Length = 16332 Score = 1011 bits (510), Expect = 0.0 Identities = 606/630 (96%), Gaps = 6/630 (0%) Strand = Plus / Plus Query: 50 ttaacatctgaacttatcggagtgacactatccgtgacataggttccattatttgatatt 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14046 ttaacatctgaacttatcggagtgacactatccgtgacataggttccattatttgatatt 14105 Query: 110 gtagctaggtctccagttgctctgatattctctgtgatgatagaactgtttttattgaag 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14106 gtagctaggtctccagttgctctgatattctctgtgatgatagaactgtttttattgaag 14165 Query: 170 gttatgttgatgatatattcatagttggtaatgcttgcggacgtttgaatgacaaatccc 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14166 gttatgttgatgatatattcatagttggtaatgcttgcggacgtttgaatgacaaatccc 14225 Query: 230 cctgttctggtctgcaacggtaaaaccggttttgcagttctggtgcaagaatggcaagcc 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14226 cctgttctggtctgcaacggtaaaaccggttttgcagttctggtgcaagaatggcaagcc 14285 Query: 290 acatttacctaagtcgaaggcttgcttcctgtggtacggtacggtcatctctacatcttt 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14286 acatttacctaagtcgaaggcttgcttcctgtggtacggtacggtcatctctacatcttt 14345 Query: 350 ttgtcattttaagttccaatagtttttcgtttacccttattagtgacttcagcggctaat 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14346 ttgtcattttaagttccaatagtttttcgtttacccttattagtgacttcagcggctaat 14405 Query: 410 tcattggtatataaatctcttcatcagaatctaatgattagagtatcgttttttcaacct 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14406 tcattggtatataaatctcttcatcagaatctaatgattagagtatcgttttttcaacct 14465 Query: 470 actttatcgttgttctatagcaa-gcactatgtgggttaaaggcatactgatcat-taat 527 ||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||| Sbjct: 14466 actttatcgttgttctatagcaaggcactaggtgggttaaaggcatactgatcatataat 14525 Query: 528 gagtgttgcagcggggactttggt-ttcatggcttatggca-ttttaagcccatagtaga 585 |||||||||||||||||||||||| ||||||||| |||||| | | |||||||||| ||| Sbjct: 14526 gagtgttgcagcggggactttggtattcatggctgatggcagtctaaagcccatagaaga 14585 Query: 586 tgtcaccataga-gaagaatttttgtcctcagatggggttgcc-attttgggcaaagctt 643 |||||| ||||| |||||| | ||||||||||||||| |||| |||| | ||| ||| | Sbjct: 14586 tgtcacgatagaggaagaagtattgtcctcagatgggtctgccaatttcgtgcagagcat 14645 Query: 644 cttttactgccttgaaagaaggtttgaaat 673 | || |||||| |||||||| ||||||||| Sbjct: 14646 cattaactgccatgaaagaatgtttgaaat 14675 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,652 Number of Sequences: 1807 Number of extensions: 11652 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)