BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZA06FM1.SCF screened BAC_end (986 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1762 708 0.0 >3x_Contig1762 Length = 22098 Score = 708 bits (357), Expect = 0.0 Identities = 385/393 (97%), Gaps = 1/393 (0%) Strand = Plus / Minus Query: 87 gcacttacatgcagtgtattcgtcatctccgaattggtatcctccgcggtccaatttgtt 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7345 gcacttacatgcagtgtattcgtcatctccgaattggtatcctccgcggtccaatttgtt 7286 Query: 147 gatgttgctctcctgttgtatgcagatcttttcctcaagttattatttaaattattgttg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7285 gatgttgctctcctgttgtatgcagatcttttcctcaagttattatttaaattattgttg 7226 Query: 207 ttgaaaccatattgtatatcagaagtcttacgacgttgtatggcattagaaagggaagcg 266 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7225 ttgaaaccataaggtatatcagaagtcttacgacgttgtatggcattagaaagggaagcg 7166 Query: 267 cttgacccatgattattgggagcaaggttgccgtaacttttctttctcacagagtttgat 326 ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7165 cttgacccaggagtattgggagcaaggttgccgtaacttttctttctcacagagtttgat 7106 Query: 327 gaatctaaactcaaagtcggagattttaacgtcaccgaatctgaactgtcttgtaatagt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7105 gaatctaaactcaaagtcggagattttaacgtcaccgaatctgaactgtcttgtaatagt 7046 Query: 387 tgtatactatagaaaaataactgttcagtggttcgttgatagaatagtgccactccaaaa 446 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 7045 tgtatactatagaaaaataactgttcagtggttcgttgatagaaaagtgccactccaaaa 6986 Query: 447 gaatctgcttttggggatgtatttgagctcaat 479 |||||||||||| |||| |||| |||||||||| Sbjct: 6985 gaatctgctttt-gggaagtatatgagctcaat 6954 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,442 Number of Sequences: 1807 Number of extensions: 14442 Number of successful extensions: 99 Number of sequences better than 1.0e-20: 1 length of query: 986 length of database: 10,358,551 effective HSP length: 16 effective length of query: 970 effective length of database: 10,329,639 effective search space: 10019749830 effective search space used: 10019749830 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)