BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZA11RM1.SCF screened BAC_end (933 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig995 363 e-100 >3x_Contig995 Length = 2553 Score = 363 bits (183), Expect = e-100 Identities = 320/359 (89%), Gaps = 5/359 (1%) Strand = Plus / Minus Query: 458 taaatccttggcttaagatgtactcatggaataattgtactcgttttccagatacaggga 517 ||||||||| ||||| || |||||| ||||||||||||| ||||||| ||||||||| Sbjct: 2424 taaatccttttcttaatattaactcatttaataattgtactctttttccatatacaggga 2365 Query: 518 atctattgtagaattctcttgaatctgatttcaactccgaaatgaagcttgatttagtta 577 ||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct: 2364 atctattttataattctctttaatctgatttcaactccgaaatgaagcttgatttagt-a 2306 Query: 578 aaagttcc-tggaattgttttatagaattcgacactgccaatgcatcggcaaacccatag 636 |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2305 aaagttccctggaattgttttatagaatccgacactgccaatgcatcggcaaacccatag 2246 Query: 637 atattgcgagcgaccatagtcataccattgaaagtctcgattactgatttgttatttatt 696 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2245 atattgcgagcgaccatagtcataccattgaaagtctcgattactgatttgtta-ttatt 2187 Query: 697 gaataagaaagtccttttcgattccagcagacattccaaatgtaaatggttggggttcct 756 | ||||| |||| ||||||||| |||||||||| ||||||| | | ||| | |||| | Sbjct: 2186 gtataag-aagttcttttcgataccagcagacaatccaaattgagactgtttgtgttcgt 2128 Query: 757 cagatttaccggttaaagggttgcttgattaattccaattaatggtggtttgcataaac 815 |||||| ||| | | ||||||||||||| ||| ||||| ||| |||||| |||||||| Sbjct: 2127 cagattcacc-gatgaagggttgcttgaataagtccaagtaagtgtggttagcataaac 2070 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,743 Number of Sequences: 1807 Number of extensions: 13743 Number of successful extensions: 116 Number of sequences better than 1.0e-20: 1 length of query: 933 length of database: 10,358,551 effective HSP length: 16 effective length of query: 917 effective length of database: 10,329,639 effective search space: 9472278963 effective search space used: 9472278963 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)