BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZB02FM1.SCF screened BAC_end (930 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig692 1189 0.0 >3x_Contig692 Length = 2077 Score = 1189 bits (600), Expect = 0.0 Identities = 701/728 (96%), Gaps = 5/728 (0%) Strand = Plus / Minus Query: 86 acggtggtatgcgtggtatcaagggtcttgtttgggaaggttccgttttggacccagaag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2062 acggtggtatgcgtggtatcaagggtcttgtttgggaaggttccgttttggacccagaag 2003 Query: 146 aaggtattagattcagaggtcgtaccattccagatatccaaaaggaattgccaaaggcag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2002 aaggtattagattcagaggtcgtaccattccagatatccaaaaggaattgccaaaggcag 1943 Query: 206 ccgatggtgaagaaccattgccagaagctatcttttggttgcttttgaccggtgaagttc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1942 ccgatggtgaagaaccattgccagaagctatcttttggttgcttttgaccggtgaagttc 1883 Query: 266 caactgaaactcaagttaaggctttgtcagcagatttggcttctagatctgagttgccag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1882 caactgaaactcaagttaaggctttgtcagcagatttggcttctagatctgagttgccag 1823 Query: 326 ctcatgttgagtctctattggataacttaccaaaggatttgcatccaatggctcaattct 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1822 ctcatgttgagtctctattggataacttaccaaaggatttgcatccaatggctcaattct 1763 Query: 386 cgatggcagttactgcattggaatcagaatccaaatttgccaaggcttacgctcaaggtg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1762 cgatggcagttactgcattggaatcagaatccaaatttgccaaggcttacgctcaaggtg 1703 Query: 446 tttctaagaaggattactggaactatacttttgaagattctttggatctattgggtaagt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1702 tttctaagaaggattactggaactatacttttgaagattctttggatctattgggtaagt 1643 Query: 506 tgccagttatcgcctccaagatttaccgtaacgttttcaaagacggtaagatcacttcca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1642 tgccagttatcgcctccaagatttaccgtaacgttttcaaagacggtaagatcacttcca 1583 Query: 566 ttgatcaaaacgccgattacggtaagaacttggcccatctatttgggttaccaaa-caaa 624 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 1582 ttgatcaaaacgccgattacggtaagaacttggcccatctatt-gggttaccaaaacaaa 1524 Query: 625 gagtttgtcgacttgatgagattggacttgaccattcattctgaccattaagggggtaac 684 |||||||||||||||||||||||| |||||||||| |||||||||||| |||| |||||| Sbjct: 1523 gagtttgtcgacttgatgagattgtacttgaccatccattctgaccatgaaggtggtaac 1464 Query: 685 gtttcagctcac-ctacccatttggttgggtc-ggattggcccttccat-tttattcttg 741 |||||||||||| |||||||||||||||| || | |||| || ||||| ||||| |||| Sbjct: 1463 gtttcagctcacactacccatttggttggttctgcattgtcctctccatatttatccttg 1404 Query: 742 tcccctggttttaacgggttggttgggccttttgacggacctgccaaccaagaaattttg 801 ||| ||||||| |||||||||| ||| || || |||||| ||| ||||||||| | ||| Sbjct: 1403 tccgctggtttgaacgggttggctggtccattgcacggacgtgcaaaccaagaagtcttg 1344 Query: 802 gaagggtt 809 ||| |||| Sbjct: 1343 gaatggtt 1336 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6190 Number of Sequences: 1807 Number of extensions: 6190 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 930 length of database: 10,358,551 effective HSP length: 16 effective length of query: 914 effective length of database: 10,329,639 effective search space: 9441290046 effective search space used: 9441290046 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)