BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZB10FM1.SCF screened BAC_end (911 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1315 1021 0.0 >3x_Contig1315 Length = 8846 Score = 1021 bits (515), Expect = 0.0 Identities = 529/531 (99%), Gaps = 2/531 (0%) Strand = Plus / Plus Query: 86 tacaaagagtcactcttcgatgaactcttgatggaagatcagactttagcacaggaccgc 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1439 tacaaagagtcactcttcgatgaactcttgatggaagatcagactttagcacaggaccgc 1498 Query: 146 gaaaaatgcgtcaaccttttggaaacttatcaaaaagcatcaggtattatcggagacatt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1499 gaaaaatgcgtcaaccttttggaaacttatcaaaaagcatcaggtattatcggagacatt 1558 Query: 206 ctatagtcctagataggatcctaagttttattttattaagttcaaaatgtaaatagaaat 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1559 ctatagtcctagataggatcctaagttttattttattaagttcaaaatgtaaatagaaat 1618 Query: 266 gaagataatattttgtatacagaaaaaaaaaaacagtattgaatatgcaaagcattaacg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1619 gaagataatattttgtatacagaaaaaaaaaaacagtattgaatatgcaaagcattaacg 1678 Query: 326 tttatccgtgaagctaatttactgatgttggattatccaaatggtcagaatttaacctca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1679 tttatccgtgaagctaatttactgatgttggattatccaaatggtcagaatttaacctca 1738 Query: 386 gatgtggaagggatgctctttctatcatagaaaacaatatgtaccttataaacgccagat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1739 gatgtggaagggatgctctttctatcatagaaaacaatatgtaccttataaacgccagat 1798 Query: 446 tcatagaaacgcctttatcaaaaacatcaatataatcaagcagaaaaatattattaaatt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1799 tcatagaaacgcctttatcaaaaacatcaatataatcaagcagaaaaatattattaaatt 1858 Query: 506 tccaaaatatttcattaatatttttattttcggaacaataaaacatctttaatatttaaa 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1859 tccaaaatatttcattaatatttttattttcggaacaataaaacatctttaatatttaaa 1918 Query: 566 ttttagagtagtaatcaaaaaatattctattttattaaataacctagagtt 616 |||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct: 1919 ttttagagtagtaatc-aaaaatattctatttta-taaataacctagagtt 1967 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,607 Number of Sequences: 1807 Number of extensions: 14607 Number of successful extensions: 111 Number of sequences better than 1.0e-20: 1 length of query: 911 length of database: 10,358,551 effective HSP length: 16 effective length of query: 895 effective length of database: 10,329,639 effective search space: 9245026905 effective search space used: 9245026905 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)