BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZC02RM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1749 1296 0.0 >3x_Contig1749 Length = 22923 Score = 1296 bits (654), Expect = 0.0 Identities = 787/820 (95%), Gaps = 9/820 (1%) Strand = Plus / Plus Query: 43 gcttgtcctctatgttgctcaacatcttctctttcagctgcaacagatggctctgcatta 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 593 gcttgtcctctatgttgctcaacatcttctctttcagctgcaacagatggctctgcatta 652 Query: 103 tcagaatcactttcattatcaggggttaagtctgctaccgttgcttcgtcatcatatctt 162 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 653 tcagaatcactttcattatcaggggttaagtctgctaccgttgcttcgtcatcctatctt 712 Query: 163 actcttttctgaccagctctagtgatctctctcaactgttttctaccagattttggacca 222 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 713 actcttttctgaccagctctagtgatcactctcaactgttttctaccagattttggacca 772 Query: 223 gctctgattttactcatgtttgaggattcctttaccaaataaatgacacttttctactac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 773 gctctgattttactcatgtttgaggattcctttaccaaataaatgacacttttctactac 832 Query: 283 tccagcaataaccaaatacaattaatatgatgtcaatttaatatactgctcatctcatgt 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 tccagcaataaccaaatacaattaatatgatgtcaatttaatatactgctcatctcatgt 892 Query: 343 catctcatcgcatcttataatcttagatgctcaatttttcatccgtgtttaatgatctca 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 893 catctcatcgcatcttataatcttagatgctcaatttttcatccgtgtttaatgatctca 952 Query: 403 tcaggtccaggtacttgaaaagaagtgtcgaccccttcctaccgtaaagtcatgtcacag 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 953 tcaggtccaggtacttgaaaagaagtgtcgaccccttcctaccgtaaagtcatgtcacag 1012 Query: 463 cagacctgaaacacctcaaagattacgtctaccttgagaagcgattaaacaagttcaaag 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1013 cagacctgaaacacctcaaagattacgtctaccttgagaagcgattaaacaagttcaaag 1072 Query: 523 tagtgtgctcgtcatactgtttacctttttggtacgttccattccttttactactgcgcc 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1073 tagtgtgctcgtcatactgtttacctttttggtacgttccattccttttactactgcgcc 1132 Query: 583 tgtaaactgactgttttcataaaccttatat-atacaaaccaaaaaaataatgttacata 641 ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| Sbjct: 1133 tgtaaactgactgttttcataaa-cttatataatacaaacaaaaaaaataatgttacata 1191 Query: 642 gaattacgatgggaaatcttcaagcanaccagaagacgaaagagtcaagatagatagctt 701 |||||||||| ||||||||||||||| ||||||||||||| ||||||||| ||| |||| Sbjct: 1192 gaattacgat-ggaaatcttcaagcaaaccagaagacgaaggagtcaagaaagaaggctt 1250 Query: 702 gagcccattcac-atagcccgtcactgtgcaaatttc-acgtgttccagatgccanctat 759 ||| |||| || |||||||||||||||||||| ||| |||| | | |||||||| || Sbjct: 1251 gag-ccatcaacaatagcccgtcactgtgcaaaattcaacgtttccaagatgccactaat 1309 Query: 760 aaagaagagtgtgcttcaaactctgcggaatattctcacgaacatggtatctatttctcg 819 ||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||| Sbjct: 1310 aaagaagagtgtgcttcaaactctgcggatatttctcacg-acaatgtatctatttctcg 1368 Query: 820 ggcctgattaccatttccgataagtttccaatttggtggg 859 | |||||||||| ||||||||||||||||| |||||||| Sbjct: 1369 tg-ctgattacca-ttccgataagtttccaagttggtggg 1406 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6683 Number of Sequences: 1807 Number of extensions: 6683 Number of successful extensions: 146 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)