BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZC08FM1.SCF screened BAC_end (927 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1538 1144 0.0 >3x_Contig1538 Length = 9120 Score = 1144 bits (577), Expect = 0.0 Identities = 664/689 (96%), Gaps = 3/689 (0%) Strand = Plus / Plus Query: 86 ttttcgacatttatagataatacttctggacttcgctgttacgatggactcgctggtaat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16 ttttcgacatttatagataatacttctggacttcgctgttacgatggactcgctggtaat 75 Query: 146 ttggcaatgcacctaatatgctctttattatacagtgaatttttttttgcgtcagaacta 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 ttggcaatgcacctaatatgctctttattatacagtgaatttttttttgcgtcagaacta 135 Query: 206 aatatgtatctcattaaacttgtataattatgaacctttaacttcaaaagcatcttctat 265 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136 aatatgtatctcagtaaacttgtataattatgaacctttaacttcaaaagcatcttctat 195 Query: 266 tgctgaaacaatgacacattggtgaccacccaacactatctcgaaaaacacaaaaatgca 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tgctgaaacaatgacacattggtgaccacccaacactatctcgaaaaacacaaaaatgca 255 Query: 326 aatgaccttcaatcgttaatatattaccggcattttacttatggttcgtcttccgcagta 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 aatgaccttcaatcgttaatatattaccggcattttacttatggttcgtcttccgcagta 315 Query: 386 tttgtgcctttgtatgaatggcacggcaatttggatgagacatcaaatacgtataaagtg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 316 tttgtgcctttgtatgaatggcacggcaatttggatgagacatcaaatacgtataaagtg 375 Query: 446 atcatatattaccataagtaatcaaaacaatgtactgcacataatcaaacataaacacag 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 376 atcatatattaccataagtaatcaaaacaatgtactgcacataatcaaacataaacacag 435 Query: 506 acgcgatgagatgcaactatacaaaatacgctgaaaccactgctaaacagtagcaaaaca 565 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 436 acgcgatgagatgcaactatacaaaaaacgctgaaaccactgctaaacagtagcaaaaca 495 Query: 566 tgtctgatgatcaggggacagatctgaatctaggtgagttagtcggaaacatactcgctg 625 |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 496 tgtctgatgatcagggaacagatctgaatctaagtgagttagtcggaaacatactcgctg 555 Query: 626 cctccgatgatattattcggtcgtttgaaaacccacaaa-gcctgatgagccttaaaatg 684 |||||||||||| ||||| |||||| ||| || |||||| || |||||||| | |||||| Sbjct: 556 cctccgatgataatattccgtcgttagaagacacacaaaggcatgatgagcatcaaaatg 615 Query: 685 acaaccatcttttgggggaagatgattttttgccagattggctaccttatttctcaaata 744 ||||| ||| | | |||||||||||| | |||||||||| |||||| ||| ||||||||| Sbjct: 616 acaacgatcatattggggaagatgatatcttgccagatttgctacc-tatatctcaaata 674 Query: 745 cctgaagatgaacatgcctcaagaccatt 773 ||||| ||||| |||| |||||||||||| Sbjct: 675 cctgatgatgagcatg-ctcaagaccatt 702 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6531 Number of Sequences: 1807 Number of extensions: 6531 Number of successful extensions: 39 Number of sequences better than 1.0e-20: 1 length of query: 927 length of database: 10,358,551 effective HSP length: 16 effective length of query: 911 effective length of database: 10,329,639 effective search space: 9410301129 effective search space used: 9410301129 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)