BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZC08RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1719 1138 0.0 >3x_Contig1719 Length = 15804 Score = 1138 bits (574), Expect = 0.0 Identities = 646/666 (96%), Gaps = 3/666 (0%) Strand = Plus / Minus Query: 48 gcttgcagcatatttgagtgatacgcactcaaattacaaccaataggagaaccaatgggc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 704 gcttgcagcatatttgagtgatacgcactcaaattacaaccaataggagaaccaatgggc 645 Query: 108 gttaataacagtatagaccatccccttaacttttcacaagcctactgctcaaatgcattg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 644 gttaataacagtatagaccatccccttaacttttcacaagcctactgctcaaatgcattg 585 Query: 168 ggccaatttccgatgaactaagccaagcctttttcctttctgtacgcttttgcctatgca 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 584 ggccaatttccgatgaactaagccaagcctttttcctttctgtacgcttttgccgatgca 525 Query: 228 caatacaatttcaaaaaaattcaaactttggacaatttcaatttcatcactttggaaggg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 caatacaatttcaaaaaaattcaaactttggacaatttcaatttcatcactttggaaggg 465 Query: 288 catgtaaaaggggcaaacttgaaaggcaactgaagcggtatatatatctaatcagcgtgt 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 catgtaaaaggggcaaacttgaaaggcaactgaagcggtatatatatctaatcagcgtgt 405 Query: 348 caacgagttgtctgttagagcaaatctgatacttaaattaatctttcgaaggacaaacaa 407 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 404 caacgagttgtctgttagagcaaatctga-acttaaattaatctttcgaaggacaaacaa 346 Query: 408 gcgtctttgtcgagggaaagaaagttaatttattataagggcaaagagagagagcactca 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 345 gcgtctttgtcgagggaaagaaagttaatttattataagggcaaagagagagagcactca 286 Query: 468 tataaaaaacacgaagaacgtgaattt-aacagataaaaagcgttaagttttgaagttta 526 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 285 aataaaaaacacgaagaacgtgaatttaaacagataaaaagcgttaagttttgaagttta 226 Query: 527 gagcgtatacagcgatattgatagcaaattacaatcaatatattttccccctagagagtc 586 ||||||||||||||| || ||||||| |||||||||||||||||||||||||||||| Sbjct: 225 gagcgtatacagcgaataagaaagcaaataacaatcaatatattttccccctagagagtc 166 Query: 587 atgtcgttcaaaggttttacaaaagctggcgccagagcaccccattcttttatgc-aaaa 645 |||||||||||||||||||||||||||| ||||||||||||||| ||||||| || |||| Sbjct: 165 atgtcgttcaaaggttttacaaaagctgtcgccagagcaccccagtcttttaggcaaaaa 106 Query: 646 ctgaacatgggtcaacagactgttgatcctgttaatgatgatgctgatcggccgttcaag 705 |||||||||||||| |||||||||||||||||| |||| ||||||||||| | |||||| Sbjct: 105 ctgaacatgggtcagcagactgttgatcctgtttatgaggatgctgatcgtcgtttcaag 46 Query: 706 gaattg 711 |||||| Sbjct: 45 gaattg 40 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7413 Number of Sequences: 1807 Number of extensions: 7413 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)