BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZC09RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1154 1388 0.0 >3x_Contig1154 Length = 6277 Score = 1388 bits (700), Expect = 0.0 Identities = 755/768 (98%), Gaps = 4/768 (0%) Strand = Plus / Plus Query: 48 ttaaaaaatacatccgcagtactcattagctatcatgacatacagaaataaaacgtatgt 107 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 4067 ttaaaaaatacatccgcag-actcattagctatcatgacatacagaaataaaacgtatgt 4125 Query: 108 tatgtattcaagctgtgccaaaaagttacaggcaaagattaaacacgatgaagaaccatt 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4126 tatgtattcaagctgtgccaaaaagttacaggcaaagattaaacacgatgaagaaccatt 4185 Query: 168 taacgccaaacggattccattattatctgagctactttgaaaatcactatagatttattt 227 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 4186 taacgccaaacggattccattattatctgagctactttgaaaatcactatagaattattt 4245 Query: 228 acattaagtagaggtggatacaaaacttaatacgctgccgcagaattttaccaattcatc 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4246 acattaagtagaggtggatacaaaacttaatacgctgccgcagaattttaccaattcatc 4305 Query: 288 caatgattggcccttgcggtgattggtatcccaatgttgcagagcagtcttgatattttg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4306 caatgattggcccttgcggtgattggtatcccaatgttgcagagcagtcttgatattttg 4365 Query: 348 atttgtgttattagaatgaattacatcaccatgcactctgaataagatggtaatatatgc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4366 atttgtgttattagaatgaattacatcaccatgcactctgaataagatggtaatatatgc 4425 Query: 408 ctcatataactcaaagttcttgttggtagccaaaccttgagccaaactttcaatgaaccg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4426 ctcatataactcaaagttcttgttggtagccaaaccttgagccaaactttcaatgaaccg 4485 Query: 468 acatagctcatcaaatggttgaaaagctttcaaagaacgaatctccaaatcaatatttga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4486 acatagctcatcaaatggttgaaaagctttcaaagaacgaatctccaaatcaatatttga 4545 Query: 528 gggagtcatctggactaattcgtcaaggaatgctgaataatcgtttttctgcgaaccttc 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4546 gggagtcatctggactaattcgtcaaggaatgctgaataatcgtttttctgcgaaccttc 4605 Query: 588 tctaagtagcttagtgaaatcagattcgaactgagcaccaagttttcctggaagtttgaa 647 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 4606 tctaagtagcttagtgaaatcagattcgaactgagcaccaagttttcctgaaggtttgaa 4665 Query: 648 tttattcagttcactagcagcattagctttggcagcatttcgctcctgttgtagtttaga 707 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4666 tttattcagttcactagcagcattagctttggcagcatttcgctcctgttgtagtttaga 4725 Query: 708 agaattcaaactcaaattctcagcggctttccttggctgaagcctcatcggccaccttat 767 |||| |||||||||||||||||| || |||| ||||||||||||||||| ||||||||| Sbjct: 4726 ggaatccaaactcaaattctcagc-gccttccctggctgaagcctcatcgcccaccttat 4784 Query: 768 ctttttgcaagttgtaagaagaatggnagcctgctctgggttaactgg 815 | |||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 4785 c-ttttgcaagttgtaagaagaatgg-agcctgctctggtttaactgg 4830 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7128 Number of Sequences: 1807 Number of extensions: 7128 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)