BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZC12RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1419 0.0 >3x_Contig1640 Length = 15521 Score = 1419 bits (716), Expect = 0.0 Identities = 811/837 (96%), Gaps = 5/837 (0%) Strand = Plus / Minus Query: 40 gcttctttaa-aattgatttcccttctgtagtccatcgataaatttcttttctattagtt 98 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5318 gcttctttaacaattgatttcccttctgtagtccatcgataaatttcttttctattagtt 5259 Query: 99 taaattcaatggattggaccattgtctccaaatttattatctgatcagaacactgttcca 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5258 taaattcaatggattggaccattgtctccaaatttattatctgatcagaacactgttcca 5199 Query: 159 ataatcgttcctgataatgtatccgctttaacaacaatctcgcacgattaccctgcc-ca 217 |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 5198 ataatcgttcctgataatgtatccgctttaacaacaatctcgcacgattatcctgtttca 5139 Query: 218 attgcttccccttaagtttaatgcaaagagtccttaactcagctctttcgacccctatca 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5138 attgcttccccttaagtttaatgcaaagagtccttaactcagctctttcgacccctatca 5079 Query: 278 aattttcagtacgacgagaatatctatgtaactcatctttagccatcttcagttgcaaca 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5078 aattttcagtacgacgagaatatctatgtaactcatctttagccatcttcagttgcaaca 5019 Query: 338 ttgccttatcggactctgtaacttttattcgacttccttgttgtcccatctcgtgaatat 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5018 ttgccttatcggactctgtaacttttattcgacttccttgttgtcccatctcgtgaatat 4959 Query: 398 atgtgcttgtttttatactaccaaaagtactaacaagtgtagctattgaactaccacttt 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4958 atgtgcttgtttttatactaccaaaagtactaacaagtgtagctattgaactaccacttt 4899 Query: 458 cgattccgttactaactccaaacccttctccaatatcaaaaagtcgtttgacaataagtc 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4898 cgattccgttactaactccaaacccttctccaatatcaaaaagtcgtttgacaataagtc 4839 Query: 518 ttcaactgttgggctttcctcatagatgcatagaatggatattcactgtatcgataacgc 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4838 ttcaactgttgggctttcctcatagatgcatagaatggatattcactgtatcgataacgc 4779 Query: 578 ataatggacctttggatcgacatanagatttcaagatagtatatntaaatattacccaga 637 |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 4778 ataatggacctttggatcgacataaagatttcaagatagtatatttaaatattacccaga 4719 Query: 638 ccaagtcacatgccacccatttgccagaaaaagatgaaatagtattcaagtcacgtgaaa 697 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4718 caaagtcacatgcaacccatttgccagaaaaagatgaaatagtattcaagtcacgtgaaa 4659 Query: 698 ttacacagaacactgcttgtaaaagaccgctctgggccgtcgcaagcacaacatcatgaa 757 ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| Sbjct: 4658 ttacacagaacactgcttgtaaaagaccgctctgggcggtcgcaagcacaacaacatgaa 4599 Query: 758 atcaagccgnaagaatttagccagcccgcctacttcgtaagtaaaggttttttgacatat 817 ||||||||| ||||| |||||||| |||||||||||||| |||||| |||||||||||| Sbjct: 4598 atcaagccgcaagaagttagccag-ccgcctacttcgtagttaaagggtttttgacatat 4540 Query: 818 tcctcgagaatgatcatgtcaactttacgatcattttgaaggtgaaccctatcatac 874 | ||||||| |||||||||||| |||||||| |||| || ||||| ||||||||| Sbjct: 4539 t-ctcgagatgaatcatgtcaactatacgatca-tttgtagttgaacactatcatac 4485 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6343 Number of Sequences: 1807 Number of extensions: 6343 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)