BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZD01FM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1410 1330 0.0 >3x_Contig1410 Length = 7640 Score = 1330 bits (671), Expect = 0.0 Identities = 718/730 (98%), Gaps = 3/730 (0%) Strand = Plus / Plus Query: 85 ctgaaactgcaattcccggatgctaaaccgtattacgctgacccgtcaggaacattggat 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6526 ctgaaactgcaattcccggatgctaaaccgtattacgctgacccgtcaggaacattggat 6585 Query: 145 atacacggtaaggcaaagcaagcagactccgccgtttacatcgaatgtaatgtctgtgga 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6586 atacacggtaaggcaaagcaagcagactccgccgtttacatcgaatgtaatgtctgtgga 6645 Query: 205 cgggaagttagtgggaacaggttcgctgctcatctcgttagatgcttatcacgtggtaga 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6646 cgggaagttagtgggaacaggttcgctgctcatctcgttagatgcttatcacgtggtaga 6705 Query: 265 aggtgagatttcattacccagccttagtgcagccttaaatcttcccccaaacccataatg 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6706 aggtgagatttcattacccagccttagtgcagccttaaatcttcccccaaacccataatg 6765 Query: 325 tgtgtcatttcaaatcaagttgtccagcatcgtaccctgtacccttaaacctgtgataac 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6766 tgtgtcatttcaaatcaagttgtccagcatcgtaccctgtacccttaaacctgtgataac 6825 Query: 385 gatctttaacccatcattataacggtgtaaagagttgtcaggtgttactctacagaagag 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6826 gatctttaacccatcattataacggtgtaaagagttgtcaggtgttactctacagaagag 6885 Query: 445 cggaaagttagagacactagaactagcaagtacccttcagagaattaaactgagttactt 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6886 cggaaagttagagacactagaactagcaagtacccttcagagaattaaactgagttactt 6945 Query: 505 atgtcgactttgctagagactttagatcaacaatgggtcaattccagattatacgttgat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6946 atgtcgactttgctagagactttagatcaacaatgggtcaattccagattatacgttgat 7005 Query: 565 aaagacgagcgcatgacccagcttgggaaatgtgttgaagaagtgcacgactttaagatc 624 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7006 aaagacgagcgcaggacccagcttgggaaatgtgttgaagaagtgcacgactttaagatc 7065 Query: 625 cagttgaagaaattgaaagcgcatttgctgaagcatggatcaagtncacagaaacgtctt 684 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 7066 cagttgaagaaattgaaagcgcatttgctgaagcatggatcaagtccacagaaacgtctt 7125 Query: 685 gttattatggagaaactagcgaaatctcataagaactgggatttcttcatgaagaaatcc 744 ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 7126 gttattagggagaaactagcgaaatctcataagaactgggattcttccatgaagaaatcc 7185 Query: 745 ttaaactcttctatcagcacttacccgaagtttttaaaaagcgtgccgtcaagccctttg 804 ||||||||||||||||||||||||| |||| |||| ||| ||||| |||||||||| ||| Sbjct: 7186 ttaaactcttctatcagcacttaccggaag-ttttcaaaggcgtg-cgtcaagccc-ttg 7242 Query: 805 aatgagtttc 814 |||||||||| Sbjct: 7243 aatgagtttc 7252 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5966 Number of Sequences: 1807 Number of extensions: 5966 Number of successful extensions: 26 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)