BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZD02FM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1522 1219 0.0 >3x_Contig1522 Length = 7810 Score = 1219 bits (615), Expect = 0.0 Identities = 724/750 (96%), Gaps = 8/750 (1%) Strand = Plus / Plus Query: 86 ttaatgcttaaattgggcaaatatgggttcattagtttaacgaaatcagtgtaaaaccat 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 850 ttaatgcttaaattgggcaaatatgggttcattagtttaacgaaatcagtgtaaaaccat 909 Query: 146 gaggcttcttcaaaatggaatagaacccgctcaactgttgataaatcttccgggggaaca 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 910 gaggcttcttcaaaatggaatagaacccgctcaactgttgataaatcttccgggggaaca 969 Query: 206 ttgagaatgaatctgacaacaaggtcttcgactgcattctccaaagaaacagtctcaaac 265 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 970 ttgagaatgaatctgacaacaaagtcttcgactgcattctccaaagaaacagtctcaaac 1029 Query: 266 ggacgtaacaacggtaatgacatatttcagtctaatttaaatggttaatggtacagtgtt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1030 ggacgtaacaacggtaatgacatatttcagtctaatttaaatggttaatggtacagagtt 1089 Query: 326 atcttggagaactttaacgagaaggaatgagatagtgtctttaaagtaattctatcaaag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1090 atcttggagaactttaacgagaaggaatgagatagtgtctttaaagtaattctatcaaag 1149 Query: 386 gtattcttgttactttcctttttttattgcaatgagcaaaacctatcgtggtgcgtaatg 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1150 gtattcttgttactttcctttttttattgcaatgagcaaaacctatcgtggtgcgtaatg 1209 Query: 446 cagtagtcacgtctataatgagctttttggtgggtgtttctgttccttccatttcaatac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1210 cagtagtcacgtctataatgagctttttggtgggtgtttctgttccttccatttcaatac 1269 Query: 506 gcacacatttctaatactaaagtatattttttctttgatagtttttagttt-aacaaaac 564 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1270 gcacacatttctaatactaaagtatattttttctttgatagtttttagtttcaacaaaac 1329 Query: 565 tttgtttagttttccaagaaaaccttgttttcctgtacatcgatgtgagggtaacataaa 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1330 tttgtttagttttccaagaaaaccttgttttcctgtacatcgatgtgagggtaacaaaaa 1389 Query: 625 -gagagttcaacgtcaaaatcaacgtacatgctaacattcaacatgctgaacacacttaa 683 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1390 ggagagtccaacgtcaaaatcaacgtacatgctaacattcaacatgctgaacacacttag 1449 Query: 684 cattagacngcgatgcatagtcgcgttgtttgttgtatcgcac-acagtatagcc-aaaa 741 |||||||| |||||||| || |||||||||||| ||| ||||| |||||| |||| |||| Sbjct: 1450 cattagacggcgatgcagagccgcgttgtttgtagtagcgcacaacagtagagccaaaaa 1509 Query: 742 cacgggcgggaaaatatc-attggc-acaagctgaccttactcaagcctgaac-atctga 798 ||||||||| ||| |||| |||||| |||||||||| |||||||||| ||| |||||| Sbjct: 1510 cacgggcggaaaagtatcaattggcaacaagctgacgttactcaagctgaaacaatctga 1569 Query: 799 atatacattttttttt-ttctgacgcggaa 827 |||||||||||||||| | ||||||||||| Sbjct: 1570 atatacatttttttttctgctgacgcggaa 1599 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,566 Number of Sequences: 1807 Number of extensions: 12566 Number of successful extensions: 56 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)