BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZD04RM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1126 1477 0.0 >3x_Contig1126 Length = 5421 Score = 1477 bits (745), Expect = 0.0 Identities = 866/892 (97%), Gaps = 11/892 (1%) Strand = Plus / Plus Query: 48 tgaagacaggcgaggaaccagaattgaaaattgaaatcggtgccaaccgttacgatttac 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3294 tgaagacaggcgaggaaccagaattgaaaattgaaatcggtgccaaccgttacgatttac 3353 Query: 108 tgtgtatcgaaggtatcgctcaatctttgaatgaatttttgggtaacgttgaagctccag 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3354 tgtgtatcgaaggtatcgctcaatctttgaatgaatttttgggtaacgttgaagctccag 3413 Query: 168 agtataagttgagcaaaccaactaccaagttaatcattgaagaatctacaactcaaatta 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3414 agtataagttgagcaaaccaactaccaagttaatcattgaagaatctacaactcaaatta 3473 Query: 228 gaagttacgcttgtgctgccatcttaagaaatgttacattcaccgaagccaactatgcat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3474 gaagttacgcttgtgctgccatcttaagaaatgttacattcaccgaagccaactatgcat 3533 Query: 288 cgttcatttctcttcaagataagttacactcaaacttgtgtagaaacagaactttagttg 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3534 cgttcatttctcttcaagataagttacactcaaacttgtgtagaaacagaactttagttg 3593 Query: 348 ccattggtacacacgatttggataccattaaaggtcctttccactacagagctgaaaagc 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3594 ccattggtacacacgatttggataccattaaaggtcctttccactacagagctgaaaagc 3653 Query: 408 caactgacatcaagtttgtgcccttaaatcaaagtaaggaatacgatggtgcagagttaa 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3654 caactgacatcaagtttgtgcccttaaatcaaagtaaggaatacgatggtgcagagttaa 3713 Query: 468 tcgaattgtacaaacaaccagaacaaaagaacaacttgggccgtttcgttcacattatcg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3714 tcgaattgtacaaacaaccagaacaaaagaacaacttgggccgtttcgttcacattatcg 3773 Query: 528 aagattcccctgttttt-cctgtcatctacgatgacaataatgtcgtttgttctctgcct 586 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 3774 aagattcccctgtttttacacttcatctacgatgacaataatgtcgtttgttctctgcct 3833 Query: 587 cctttgattaactctgaacactctaaaatttctctgaacaccaagaatatttttatcgaa 646 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3834 cctttgattaactctgaacactctaaaatttctctgaacaccaagaatatttttatcgaa 3893 Query: 647 gtttactgc-accgatagaaccaagtccgaagttgtcttggaccaaatcgttgctatgtn 705 | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3894 g-ttactgcaaccgatagaaccaagtccgaagttgtcttggaccaaatcgttgctatgtt 3952 Query: 706 tctccgttattgtgaagaccaattcaccgtggagccagtggaaattgtttctgaa-acac 764 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3953 ctcccgttattgtgaagaccaattcaccgtggagccagtggaaattgtttctgaacaca- 4011 Query: 765 acaatcaatctagaagtacccccaaatttcacttccaaaattatggacgtcaaggtcgat 824 ||||||||||||| |||| |||||||||||||| | |||||||||||||||||||||||| Sbjct: 4012 acaatcaatctag-agtaaccccaaatttcactccaaaaattatggacgtcaaggtcgat 4070 Query: 825 tacatcaattcttgtctaagcctaaccttattcccagnaagagatctcaaagaacttgaa 884 |||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||| | Sbjct: 4071 tacatcaattcttgtctaggcctaaccttatccccag-aagagatctcaaagaacttg-a 4128 Query: 885 aaaaaatggcgtttgaaagctacaaccttcctctgaacgacccaaacatctt 936 |||| ||| || ||||||||||| ||||||||||| |||||| ||||||||| Sbjct: 4129 aaaagatgtcg-ttgaaagctac-accttcctctg-acgaccaaaacatctt 4177 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7162 Number of Sequences: 1807 Number of extensions: 7162 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)