BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC39ZD05RM1.SCF screened BAC_end
         (915 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1596                                                        1538   0.0  

>3x_Contig1596 
          Length = 11686

 Score = 1538 bits (776), Expect = 0.0
 Identities = 849/863 (98%), Gaps = 9/863 (1%)
 Strand = Plus / Plus

                                                                        
Query: 44   gcttgaactataccagtacttgagtcttaggagtaagctgaataaggaactaggtatact 103
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 492  gcttgaactataccagtacttgag-cttaggagtaagctgaataaggaactaggtatact 550

                                                                        
Query: 104  tgcttagccttttaaaaaaaaaaagcgtgaaagagaagaacctcttagcacagtttccgg 163
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551  tgcttagccttttaaaaaaaaaaagcgtgaaagagaagaacctcttagcacagtttccgg 610

                                                                        
Query: 164  cttgcttaatatgtcttcgaacggcaaacaacagggaaacaaggcaggcgatgcagctgg 223
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611  cttgcttaatatgtcttcgaacggcaaacaacagggaaacaaggcaggcgatgcagctgg 670

                                                                        
Query: 224  gggagcgtcaggagccacggctcccggtgcaggcggaagtagtggcaatggaaatagtag 283
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671  gggagcgtcaggagccacggctcccggtgcaggcggaagtagtggcaatggaaatagtag 730

                                                                        
Query: 284  tgcggccggaaatgctagcgctaatgccaatgctggcggtagcggtgccagtgggaatgc 343
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731  tgcggccggaaatgctagcgctaatgccaatgctggcggtagcggtgccagtgggaatgc 790

                                                                        
Query: 344  accggcagcttctaaaccggggttttcagcgtcagatttgaaccgcatcgttttggaata 403
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791  accggcagcttctaaaccggggttttcagcgtcagatttgaaccgcatcgttttggaata 850

                                                                        
Query: 404  tttgaataagaaggggtatcacagaacggaacagatgcttcgtgctgaatcgtcacgtac 463
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851  tttgaataagaaggggtatcacagaacggaacagatgcttcgtgctgaatcgtcacgtac 910

                                                                        
Query: 464  tttgacgcctccaaataaaaacgctgctgcttctaacacaatccctgcctcgtctgcatc 523
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911  tttgacgcctccaaataaaaacgctgctgcttctaacacaatccctgcctcgtctgcatc 970

                                                                        
Query: 524  agccactgcgattacaggaagtactaccactgcaaaacctgtttcaaatccttcgatgcc 583
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  agccactgcgattacaggaagtactaccactgcaaaacctgtttcaaatccttcgatgcc 1030

                                                                        
Query: 584  cttgaaaagagataacaacggccaattgataaaaccgcaacaggtgacacccttgcacta 643
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1031 cttgaaaagagataacaacggccaattgataaaaccgcaacaggtgacacccttgcacta 1090

                                                                        
Query: 644  ttttagagcttactcaatgttgaaaaattggatcgattcgtctttag-attgtacaaacc 702
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1091 ttttagagcttactcaatgttgaaaaattggatcgattcgtctttagaattgtacaaacc 1150

                                                                        
Query: 703  tgagctatcacgtatcatatacccgattttcatttacgtttttttacagttggtcatcaa 762
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1151 tgagctatcacgtatcatatacccgattttcatttacgtttttttacagttggtcatcaa 1210

                                                                        
Query: 763  ggaccccttac-agcgagaagattctttgac-agtattctgtcgattacaaagcccttc- 819
            ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| 
Sbjct: 1211 ggaccccttacaagcgagaagattctttgacaagtattctgtcgattacaaagcccttca 1270

                                                                        
Query: 820  tggatcagaaa-taaccgattattcagtgtc-actcagttgatcacatca--gaaaatga 875
            ||||||||||| ||||||||||||||||||| ||||||| ||||||||||  ||||||||
Sbjct: 1271 tggatcagaaattaaccgattattcagtgtcaactcagtagatcacatcaaggaaaatga 1330

                                   
Query: 876  gttgggctaagggttccaaacca 898
            |||||   |||| ||||||||||
Sbjct: 1331 gttggctcaaggtttccaaacca 1353


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,600
Number of Sequences: 1807
Number of extensions: 10600
Number of successful extensions: 70
Number of sequences better than 1.0e-20: 1
length of query: 915
length of database: 10,358,551
effective HSP length: 16
effective length of query: 899
effective length of database: 10,329,639
effective search space: 9286345461
effective search space used: 9286345461
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)