BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZD05RM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1596 1538 0.0 >3x_Contig1596 Length = 11686 Score = 1538 bits (776), Expect = 0.0 Identities = 849/863 (98%), Gaps = 9/863 (1%) Strand = Plus / Plus Query: 44 gcttgaactataccagtacttgagtcttaggagtaagctgaataaggaactaggtatact 103 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 492 gcttgaactataccagtacttgag-cttaggagtaagctgaataaggaactaggtatact 550 Query: 104 tgcttagccttttaaaaaaaaaaagcgtgaaagagaagaacctcttagcacagtttccgg 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 tgcttagccttttaaaaaaaaaaagcgtgaaagagaagaacctcttagcacagtttccgg 610 Query: 164 cttgcttaatatgtcttcgaacggcaaacaacagggaaacaaggcaggcgatgcagctgg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 cttgcttaatatgtcttcgaacggcaaacaacagggaaacaaggcaggcgatgcagctgg 670 Query: 224 gggagcgtcaggagccacggctcccggtgcaggcggaagtagtggcaatggaaatagtag 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 gggagcgtcaggagccacggctcccggtgcaggcggaagtagtggcaatggaaatagtag 730 Query: 284 tgcggccggaaatgctagcgctaatgccaatgctggcggtagcggtgccagtgggaatgc 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 tgcggccggaaatgctagcgctaatgccaatgctggcggtagcggtgccagtgggaatgc 790 Query: 344 accggcagcttctaaaccggggttttcagcgtcagatttgaaccgcatcgttttggaata 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 791 accggcagcttctaaaccggggttttcagcgtcagatttgaaccgcatcgttttggaata 850 Query: 404 tttgaataagaaggggtatcacagaacggaacagatgcttcgtgctgaatcgtcacgtac 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 851 tttgaataagaaggggtatcacagaacggaacagatgcttcgtgctgaatcgtcacgtac 910 Query: 464 tttgacgcctccaaataaaaacgctgctgcttctaacacaatccctgcctcgtctgcatc 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 911 tttgacgcctccaaataaaaacgctgctgcttctaacacaatccctgcctcgtctgcatc 970 Query: 524 agccactgcgattacaggaagtactaccactgcaaaacctgtttcaaatccttcgatgcc 583 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 971 agccactgcgattacaggaagtactaccactgcaaaacctgtttcaaatccttcgatgcc 1030 Query: 584 cttgaaaagagataacaacggccaattgataaaaccgcaacaggtgacacccttgcacta 643 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1031 cttgaaaagagataacaacggccaattgataaaaccgcaacaggtgacacccttgcacta 1090 Query: 644 ttttagagcttactcaatgttgaaaaattggatcgattcgtctttag-attgtacaaacc 702 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1091 ttttagagcttactcaatgttgaaaaattggatcgattcgtctttagaattgtacaaacc 1150 Query: 703 tgagctatcacgtatcatatacccgattttcatttacgtttttttacagttggtcatcaa 762 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1151 tgagctatcacgtatcatatacccgattttcatttacgtttttttacagttggtcatcaa 1210 Query: 763 ggaccccttac-agcgagaagattctttgac-agtattctgtcgattacaaagcccttc- 819 ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1211 ggaccccttacaagcgagaagattctttgacaagtattctgtcgattacaaagcccttca 1270 Query: 820 tggatcagaaa-taaccgattattcagtgtc-actcagttgatcacatca--gaaaatga 875 ||||||||||| ||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 1271 tggatcagaaattaaccgattattcagtgtcaactcagtagatcacatcaaggaaaatga 1330 Query: 876 gttgggctaagggttccaaacca 898 ||||| |||| |||||||||| Sbjct: 1331 gttggctcaaggtttccaaacca 1353 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,600 Number of Sequences: 1807 Number of extensions: 10600 Number of successful extensions: 70 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)