BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZD09RM1.SCF screened BAC_end (948 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1678 1136 0.0 >3x_Contig1678 Length = 12472 Score = 1136 bits (573), Expect = 0.0 Identities = 620/633 (97%), Gaps = 2/633 (0%) Strand = Plus / Plus Query: 45 cttctagggaaggtttaggttactgtgaactaaccccaagtgtcattacaaagcattttg 104 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8944 cttctagggaaggtttaggttaccgtgaactaaccccaagtgtcattacaaagcattttg 9003 Query: 105 aagatgtgggtttagattcagaaattgccaaccatacacctttgggttctctatccggtg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9004 aagatgtgggtttagattcagaaattgccaaccatacacctttgggttctctatccggtg 9063 Query: 165 gtcaattggttaaagtcgttattgctggtgcaatgtggaataatcctcatttgttgtttt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 9064 gtcaattggttaaagtcgttattgctggtgcaatgtggaataatcctcatttgttggttt 9123 Query: 225 tagatgaacctacaaattatttggatagagactccctaggtgctctagctatggctattc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9124 tagatgaacctacaaattatttggatagagactccctaggtgctctagctatggctattc 9183 Query: 285 gtgagtggactggtggtgttgttatgatttcgcataacaacgaattcgttggtgcactat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9184 gtgagtggactggtggtgttgttatgatttcgcataacaacgaattcgttggtgcactat 9243 Query: 345 gtccagaacaatggattgttgaaaatggtactatggtcccaaaagggtattgctgaaatt 404 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9244 gtccagaacaatggattgttgaaaatggtactatggt-ccaaaagggtattgctgaaatt 9302 Query: 405 gatcaaagtagattcgaggatggtggtaacacaaacgctgtgggcttaaacgtgaccaaa 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9303 gatcaaagtagattcgaggatggtggtaacacaaacgctgtgggcttaaacgtgaccaaa 9362 Query: 465 acaattactgatgacgactctccagctaatatcaaggttagacaaagaaagaagagactc 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9363 acaattactgatgacgactctccagctaatatcaaggttagacaaagaaagaagagactc 9422 Query: 525 acaagatatgagaagaaagctcaagccgaacgtcgtagactacgttacatcgaatggcta 584 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9423 acaagaaatgagaagaaagctcaagccgaacgtcgtagactacgttacatcgaatggcta 9482 Query: 585 ttatcaccaaatggtacaccaaaaacccgttgattcagatgatgaaagagatgatgatga 644 | ||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||| Sbjct: 9483 tcatcaccaaagggtacacc-aaaacccgttgatacagatgatgaaggagatgatgatga 9541 Query: 645 agaataattctaatcaccatctctgcctttctg 677 || ||||||||||||| |||||||| |||||| Sbjct: 9542 tgagtaattctaatcactatctctgcttttctg 9574 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8788 Number of Sequences: 1807 Number of extensions: 8788 Number of successful extensions: 69 Number of sequences better than 1.0e-20: 1 length of query: 948 length of database: 10,358,551 effective HSP length: 16 effective length of query: 932 effective length of database: 10,329,639 effective search space: 9627223548 effective search space used: 9627223548 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)