BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZD12RM1.SCF screened BAC_end (952 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1642 1124 0.0 >3x_Contig1642 Length = 16641 Score = 1124 bits (567), Expect = 0.0 Identities = 655/679 (96%), Gaps = 4/679 (0%) Strand = Plus / Minus Query: 42 cttcgtccctcgaac-ataacttttaaatacatataactgtatggaacattagaaagcac 100 |||| |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct: 15557 cttcttccctcgaactataactttgaaatacataaaactgtatggaacattagaaagcac 15498 Query: 101 aaagcaaagcgtgttgctattcaaatgcctgaagggttgct-catatactctttggtgat 159 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 15497 aaagcaaagcgtgttgctattcaaatgcctgaagggttgctgcatatactctttggtgat 15438 Query: 160 aagtgatattttggagcagttctgtcagtgtgagattgtggttatgggcgatgtttctta 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15437 aagtgatattttggagcagttctgtcagtgtgagattgtggttatgggcgatgtttctta 15378 Query: 220 tggtgcatgctgtattgatgactatacagcaagatcgttggattgtgatttcattgtcca 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15377 tggtgcatgctgtattgatgactatacagcaagatcgttggattgtgatttcattgtcca 15318 Query: 280 ttatgcacattcctgcttatttccgatcgatattactactatcaaggtactttacatctt 339 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 15317 ttatgcacattcctgcttagttccgatcgatattactactatcaaggtactttacatctt 15258 Query: 340 tgtcactatcaatattgatgagacacatctaataaagacgttacagaagaacttcccaag 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15257 tgtcactatcaatattgatgagacacatctaataaagacgttacagaagaacttcccaag 15198 Query: 400 atgttcacggattgctgcattcggaacaattcagtttaatccaactatccatagtatgaa 459 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15197 aggttcacggattgctgcattcggaacaattcagtttaatccaactatccatagtatgaa 15138 Query: 460 ggacaaattgttgcagtcggatgaacacatgttatatatcatcccccctcagatcaaacc 519 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 15137 ggacaaattgttgcagtcggaggaacacatgttatatatcatcccccctcagatcaaacc 15078 Query: 520 actttcgaagggtgaagttcttgggtgtacttttgaaagacttaac-aggaacaaataga 578 |||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||| Sbjct: 15077 actttcgaagggtgaagttcttgggtgtacttctgaaagactaaacaaggaacaaataga 15018 Query: 579 tgcgatggtttatgttggggatggtaggtttcatttataatcgggcatgattcattaccc 638 ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| Sbjct: 15017 tgcgatggtttatgttggggatggtaggtttcatttagaatcggccatgattcataaccc 14958 Query: 639 tgaaattcctgctttcagatttgatcccttttattgaaagatcacccagagaacgttccg 698 |||||||||||||||||||| |||||||| | || | ||||| |||||||||||| || Sbjct: 14957 tgaaattcctgctttcagatatgatccctataatag-aagattcaccagagaacgttacg 14899 Query: 699 atcagaaacaattggtaga 717 ||||||| ||||||||||| Sbjct: 14898 atcagaagcaattggtaga 14880 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7144 Number of Sequences: 1807 Number of extensions: 7144 Number of successful extensions: 45 Number of sequences better than 1.0e-20: 1 length of query: 952 length of database: 10,358,551 effective HSP length: 16 effective length of query: 936 effective length of database: 10,329,639 effective search space: 9668542104 effective search space used: 9668542104 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)