BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZE05FM1.SCF screened BAC_end (899 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1738 1324 0.0 >3x_Contig1738 Length = 21411 Score = 1324 bits (668), Expect = 0.0 Identities = 689/696 (98%) Strand = Plus / Minus Query: 88 agttagggtagtgcattgcgctgtggtgatttataacgggatctgctcaggggtcgaatg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18917 agttagggtagtgcattgcgctgtggtgatttataacgggatctgctcaggggtcgaatg 18858 Query: 148 aggtgtctgggtttcgatgcccacgtctagccagtcaagcaactcttgaggaaatgggta 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18857 aggtgtctgggtttcgatgcccacgtctagccagtcaagcaactcttgaggaaatgggta 18798 Query: 208 ttatgatcagtaataccacattcctgctgctaaagcagcagcaactagtggtgaacatgt 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18797 ttatgatcagtaataccacattcctgctgctaaagcagcagcaactagtggtgaacatgt 18738 Query: 268 atcttgtaagataaactcggtgttccatattgggtcttataatagtagcagtggtagtgg 327 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18737 atcttgtaagagaaactcggtgttccatattgggtcttataatagtagcagtggtagtgg 18678 Query: 328 cagtagctgaaccattactataagctttcgatcaaatttttgaggtttgaatcgaacaac 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18677 cagtagctgaaccattactataagctttcgatcaaatttttgaggtttgaatcgaacaac 18618 Query: 388 tcggatcttattggcatgtccaaggagtagaacggatccttcatcacatagtcactgtaa 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18617 tcggatcttattggcatgtccaaggagtagaacggatccttcatcacatagtcactgtaa 18558 Query: 448 atgcagtagattttacgtaatatgttttcggcgatgctgacacttgtattgttcctgaaa 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18557 atgcagtagattttacgtaatatgttttcggcgatgctgacacttgtattgttcctgaaa 18498 Query: 508 ttgttcgtgcttatcagcacgaatttgatgcccgttaagctttggaataagaacattgag 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18497 ttgttcgtgcttatcagcacgaatttgatgcccgttaagctttggaataagaacattgag 18438 Query: 568 aactcatccgtaatcatgtgtctgagtccactcttattccaattcgtgaacggttcttgg 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18437 aactcatccgtaatcatgtgtctgagtccactcttattccaattcgtgaacggttcttgg 18378 Query: 628 aaatagtccggtcccataaaacttcctaattgcaaaagtgccatcttgttctcggtactc 687 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 18377 aaatagtccggtcccataaaacttcctaattgcaaaggtgccatcttgttctcggtactc 18318 Query: 688 acgccaattccagggatgtaaagtaccttggtctcagttttctgtgaagacttgttactg 747 ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct: 18317 acgccaattccagggatgtaaggtacctgggtctcagttttctgtgaagacttgttactg 18258 Query: 748 atttgaacggccctccgtgtgagctggcttgcgatc 783 |||||||||||| || ||||||||||||| |||||| Sbjct: 18257 atttgaacggccttcggtgtgagctggctggcgatc 18222 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4443 Number of Sequences: 1807 Number of extensions: 4443 Number of successful extensions: 27 Number of sequences better than 1.0e-20: 1 length of query: 899 length of database: 10,358,551 effective HSP length: 16 effective length of query: 883 effective length of database: 10,329,639 effective search space: 9121071237 effective search space used: 9121071237 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)