BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZE09FM1.SCF screened BAC_end (895 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1677 1207 0.0 >3x_Contig1677 Length = 15081 Score = 1207 bits (609), Expect = 0.0 Identities = 711/743 (95%), Gaps = 2/743 (0%) Strand = Plus / Plus Query: 84 ttatccagttagttttatctttaagttcaggaacaagtccatagtccaactgactcttga 143 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1982 ttatccagttagttttatctttaagttcaggaacaagtccatagtccaactgactcttga 2041 Query: 144 gatcttctatcgcttcatcttgctctcttaacttcctattcaactcgcttataatgaact 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2042 gatcttctatcgcttcatcttgctctcttaacttcctattcaactcgcttataatgaact 2101 Query: 204 catgtttagtattatcaattacttctggatttttcttctcttgtgacaaaaagaactgga 263 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2102 catgtttagtattatcaattacttctcgatttttcttctcttgtgacaaaaagaactgga 2161 Query: 264 attcatgttccaaaaaggtatacttatccttccattcctgcagctcccgcttcaacgctt 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2162 attcatgttccaaaaaggtatacttatccttccattcctgcagctcccgcttcaacgctt 2221 Query: 324 taatttgttcagctggtaacacttgctctaaatcattggaagatcttctataactaccaa 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2222 taatttgttcagctggtaacacttgctctaaatcattggaagatcttctataactaccaa 2281 Query: 384 acaatgatgccccgcgtcttgttggtgtaagaatatcagattgcatcgcaatttgcaccg 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2282 acaatgatgccccgcgtcttgttggtgtaagaatatcagattgcatcgcaatttgcaccg 2341 Query: 444 ctgtgtcgaaagatgttccaacgagcatcgaanaagcctctaaaaactgttctttcgaca 503 ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 2342 ctgtgtcgaaagaggttccaacgagcatcgaaaaagcctctaaaaactgttctttcgaca 2401 Query: 504 acgttttcattggatcgttattgacccatgattctatcaccttgtcattggattgggtgg 563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2402 acgttttcattggatcgttattgacccatgattctatcaccttgtcattggattgggtgg 2461 Query: 564 tcaacttcgatggcaattctctgtcaatgaaaagaattatctncgggatatccttcgcat 623 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 2462 tcaacttcgatggcaattctctgtcaatgaaagaaattatctccgggatatccttcgcat 2521 Query: 624 a-acatatccatcgctacctgattct-aaactgaccaggcacgatctattaacctgttgc 681 | |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| Sbjct: 2522 acacatatccatcgctacctgattctaaaactgaccaggcacgatctaataacctggtgc 2581 Query: 682 tcttcggacggtttatggaaaaaagtttaccgctcacttatgttgatttccagggtttga 741 ||| || |||||| ||||||||||||||| |||||||| ||||||||||| |||||||| Sbjct: 2582 tctccgtacggttcatggaaaaaagtttagcgctcactaatgttgatttcgagggtttgt 2641 Query: 742 tttggggtgactaaccgatttggttgggcatttgcgtttaaattttggggaaacgttttg 801 ||| | ||||| || |||||| |||| |||| ||||||||||||| ||||| |||||| Sbjct: 2642 attgtgttgacttactgatttgtttggtcattggcgtttaaatttttgggaagcgttttt 2701 Query: 802 gttgggttttgtttccccttttt 824 ||| | |||||||| | |||||| Sbjct: 2702 gtttgtttttgttttcgcttttt 2724 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6075 Number of Sequences: 1807 Number of extensions: 6075 Number of successful extensions: 55 Number of sequences better than 1.0e-20: 1 length of query: 895 length of database: 10,358,551 effective HSP length: 16 effective length of query: 879 effective length of database: 10,329,639 effective search space: 9079752681 effective search space used: 9079752681 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)