BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZE11RM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1334 1217 0.0 >3x_Contig1334 Length = 7302 Score = 1217 bits (614), Expect = 0.0 Identities = 684/704 (97%), Gaps = 3/704 (0%) Strand = Plus / Plus Query: 49 ttatcaaccacccaagcatccaatttatcccactcgtcaggagatcttccgtagatagag 108 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1711 ttatcaaccacccaagcagccaatttatcccactcgtcaggagatcttccgtagatagag 1770 Query: 109 attctgtactcgcagttctgatattttgaattttccaaatctgaaatgacttccgttgtt 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1771 attctgtactcgcagttctgatattttgaattttccaaatctgaaatgacttccgttgtt 1830 Query: 169 atttcagcgagatacttaccatcgatataattgtcggtttttaggaatatctcacgtaaa 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1831 atttcagcgagatacttaccatcgatataattgtcggtttttaggaatatctcacgtaaa 1890 Query: 229 cgagattccccaataggattatatttcaaattgaatttgtcaaacctatgaaatgtatcc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1891 cgagattccccaataggattatatttcaaattgaatttgtcaaacctatgaaatgtatcc 1950 Query: 289 ttgtgtgcatgcatatccaaagtatcgatagaaaggtcataccctgacagtttcaacgat 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1951 ttgtgtgcatgcatatccaaagtatcgatagaaaggtcataccctgacagtttcaacgat 2010 Query: 349 tggaagacctcttctaatgtcaagattttttcatctctaaaaatgaccttttcatctttc 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2011 tggaagacctcttctaatgtcaagattttttcatctctaaaaatgaccttttcatctttc 2070 Query: 409 gaatggcgcaatttatgctttatgaaacgaagcaaatgcttttgattcatacatgccgaa 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2071 gaatggcgcaatttatgctttatgaaacgaagcaaatgcttttgattcatacatgccgaa 2130 Query: 469 tggtgaacgtgagtatctacttttctgacattgtagaaatctctatgagggttctttttt 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2131 tggtgaacgtgagtatctacttttctgacattgtagaaatctctatgagggttctttttt 2190 Query: 529 gatacagcagtttcatgatattcgtttagaagcgaatacaaattccaacgagctttcaag 588 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct: 2191 gatacagcagtttcatgatattcgtttagaagcgaatacaaattccaacgagcttcaagg 2250 Query: 589 tatttgcatcttctgaaagcaaatgattttgctggaccatcnagagagacangaatgatc 648 |||| |||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct: 2251 tattgcaatcttctgaaagcaaatgattttgctggaccatcagaggagacagaaatgatc 2310 Query: 649 ttttccatgtcaatataatattcacgttgtgttggaaagacgtttccagcctgttttttt 708 ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| Sbjct: 2311 ttttccatgtcaatataatattcacgtagtgttggaaagacgtttccagcctg-tttttt 2369 Query: 709 gtcctcaggtttaattatcatattaaaacattaacttcatcgct 752 ||||||| |||| | ||||||| |||||||| |||||||||||| Sbjct: 2370 gtcctca-gttttagtatcata-taaaacataaacttcatcgct 2411 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8057 Number of Sequences: 1807 Number of extensions: 8057 Number of successful extensions: 58 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)