BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZF02FM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig843 791 0.0 >3x_Contig843 Length = 3365 Score = 791 bits (399), Expect = 0.0 Identities = 399/399 (100%) Strand = Plus / Minus Query: 86 tctatttgtttgtctgtgtgtggattttcgttttcagctgaaagttccctactccaagac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 tctatttgtttgtctgtgtgtggattttcgttttcagctgaaagttccctactccaagac 349 Query: 146 atggagtgcttactttggatcccgtggttcatcaaaagggtatatttgggtggtgtaaat 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 atggagtgcttactttggatcccgtggttcatcaaaagggtatatttgggtggtgtaaat 289 Query: 206 caacgcaatgtcttcacactggctttgaatttttgtttgaatttctcaccaatctttata 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 caacgcaatgtcttcacactggctttgaatttttgtttgaatttctcaccaatctttata 229 Query: 266 tggttgtttatgttcaagaatgcaggtgtcatacctaccaattggcgaccacccatttgg 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 tggttgtttatgttcaagaatgcaggtgtcatacctaccaattggcgaccacccatttgg 169 Query: 326 ggtagcgtcgcttattattgtgatgcgtatatttttggtgattactggcattctcttgat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 ggtagcgtcgcttattattgtgatgcgtatatttttggtgattactggcattctcttgat 109 Query: 386 accaggttggaattcgtggtgtctctcgtgagcagtagtatcatcggtatcttatttgct 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 accaggttggaattcgtggtgtctctcgtgagcagtagtatcatcggtatcttatttgct 49 Query: 446 gtggtgccattgttcatctggtactatgtttattatacc 484 ||||||||||||||||||||||||||||||||||||||| Sbjct: 48 gtggtgccattgttcatctggtactatgtttattatacc 10 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6916 Number of Sequences: 1807 Number of extensions: 6916 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)