BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZF02RM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1792 1154 0.0 >3x_Contig1792 Length = 28468 Score = 1154 bits (582), Expect = 0.0 Identities = 681/702 (97%), Gaps = 9/702 (1%) Strand = Plus / Minus Query: 42 gcttgctggcatcatacccaggtggaaaattggtgacccaaatcgtagaatctgttagct 101 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7299 gcttgctggcatcatacccaggtggaaaattggtgacccaaatcgtagaatctgttagct 7240 Query: 102 gttcgacagttatctgatggaagccaatctttttcaaagtcctgctcactgctgttaggg 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7239 gttcgacagttatctgatggaagccaatctttttcaaagtcctgctcactgctgttaggg 7180 Query: 162 cttgatcataggaactaaattcaatccttgccaattttgaatccccatctgttgaatctg 221 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7179 cttgatcataggaactaaattcaatccttgccaattttgaatccccatctgttgaatctg 7120 Query: 222 taacatctatttgtaatatcgaaccacaagttttgaaatatcttctaaccttatgatgat 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7119 taacatctatttgtaatatcgaaccacaagttttgaaatatcttctaaccttatgatgat 7060 Query: 282 tataatttggaggcaagttcttaactaaaacagtggtatattcgcggttatgcgtatgta 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7059 tataatttggaggcaagttcttaactaaaacagtggtatattcgcggttatgcgtatgta 7000 Query: 342 aattcttaacttttttcaaggtagcagcctcctctacagagacattttcgtcttctgggc 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6999 aattcttaacttttttcaaggtagcagcctcctctacagagacattttcgtcttctgggc 6940 Query: 402 gtctcttattgttttctgcattcataagtgtaccacgtgcgattaggtcagttcataaaa 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6939 gtctcttattgttttctgcattcataagtgtaccacgtgcgattaggtcagttcataaaa 6880 Query: 462 tcaactggttcgacctgctactaatgttgcatcagctcctatcacgcaacctttaaattg 521 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 6879 tcaactggttcgacctgctactaaggttgcatcagctcctatcacgcaacctttaaattg 6820 Query: 522 attgatactattgcagtttaaagcccttaaaaactttgaat-tcaaacatattacgtgat 580 ||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| Sbjct: 6819 attgatactattgcagtttaaagcctttaaaaactttgaatatcaaacatatcacgtgat 6760 Query: 581 atcttcatggaaagatgttttttcctcagacgagcatgatcaccagttatccctgacaca 640 ||||||||||||||||| ||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 6759 atcttcatggaaagatg-tttttcctcagacgagcatgacaaccag-tatcctgaacaca 6702 Query: 641 gaatatctttcggtgaatcgcaagcttcaggttcttttgaaaactttacaaagtctattt 700 ||||||| ||||||| |||||||||||||||||| | |||||||||||||||||||| || Sbjct: 6701 gaatatc-ttcggtg-atcgcaagcttcaggttc-tctgaaaactttacaaagtcta-tt 6646 Query: 701 ttggatgggttattggacattagaatgctaagaagaaatgat 742 |||||| ||||||| | || ||||||||||||| |||||||| Sbjct: 6645 ttggat-ggttatt-gtcaatagaatgctaagatgaaatgat 6606 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8980 Number of Sequences: 1807 Number of extensions: 8980 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)