BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZF04RM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1802 1215 0.0 >3x_Contig1802 Length = 45229 Score = 1215 bits (613), Expect = 0.0 Identities = 689/704 (97%), Gaps = 8/704 (1%) Strand = Plus / Minus Query: 45 cttcggtttggtaagtagcatcgtaattatagcatccttttcctgaaggtaccattggat 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21631 cttcggtttggtaagtagcatcgtaattatagcatccttttcctgaaggtaccattggat 21572 Query: 105 aatgataataagcgacttcaaaacctgaagagggagaattcttggaaggcttacaaccga 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21571 aatgataataagcgacttcaaaacctgaagagggagaattcttggaaggcttacaaccga 21512 Query: 165 gaatggtcccaccatcagtattctgtgactctgcattactgaaaggtagtaaaaacagca 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21511 gaatggtcccaccatcagtattctgtgactctgcattactgaaaggtagtaaaaacagca 21452 Query: 225 atagcaaagaaaaacctttcgtcagcatcatacaatataattgaagactttctggtttta 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21451 atagcaaagaaaaacctttcgtcagcatcatacaatataattgaagactttctggtttta 21392 Query: 285 tcttattttactgtcagttaaagcgaaggatgtagtttttagtttatgtttcagaactgc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21391 tcttattttactgtcagttaaagcgaaggatgtagtttttagtttatgtttcagaactgc 21332 Query: 345 gagtcaaatggaatttaagcgatgttacatgaaataaagcctaacatagatctgaggtac 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21331 gagtcaaatggaatttaagcgatgttacatgaaataaagcctaacatagatctgaggtac 21272 Query: 405 agaccaaaaaatcatgttatacttatatggaaaacggtcacagacctattagacggttga 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21271 agaccaaaaaatcatgttatacttatatggaaaacggtcacagacctattagacggttga 21212 Query: 465 tcatcaaagttcaacgaaatactcgaaaataacccttgacattttaccatccaatggaca 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21211 tcatcaaagttcaacgaaatactcgaaaataacccttgacattttaccatccaatggaca 21152 Query: 525 ttgagagatagagatgatacaattgtgtataccaatttcctctc-aaatggagattat-g 582 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | Sbjct: 21151 ttgagagatagagatgatacaattgtgtataccaatttcctctcaaaatggagattatag 21092 Query: 583 caccattgcaaattc-acanagacttatgggttcaaaaa-cacacatgacatgagcagta 640 ||||||||||||||| ||| |||||||||| |||||||| |||||||||||||||||||| Sbjct: 21091 caccattgcaaattcaacaaagacttatggtttcaaaaaccacacatgacatgagcagta 21032 Query: 641 tgtctcgaattaaccgatgcaagaggtctttttttttttgcgaacatctttctacagaga 700 |||||||||| |||||||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 21031 tgtctcgaataaaccgatgcagga-gtctttttttttttgcgaacatc-ttctacagaga 20974 Query: 701 gtcacatctgttggattgcaaacaattcttgtccttatacttct 744 |||| |||||||| |||||||| ||||| |||||||||||||| Sbjct: 20973 gtca-atctgttgatttgcaaac-attctcgtccttatacttct 20932 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,127 Number of Sequences: 1807 Number of extensions: 13127 Number of successful extensions: 76 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)