BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZF10FM1.SCF screened BAC_end (943 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1082 1390 0.0 >3x_Contig1082 Length = 4646 Score = 1390 bits (701), Expect = 0.0 Identities = 743/756 (98%), Gaps = 1/756 (0%) Strand = Plus / Minus Query: 90 tcgacaagggcttggataatatgaggatggcaatggccttggttgacggcagagtaagca 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4276 tcgacaagggcttggataatatgaggatggcaatggccttggttgacggcagagtaagca 4217 Query: 150 gacaagaaatccaaatattcctttccttcaggatcccaaacatgggcaccactagctctg 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4216 gacaagaaatccaaatattcctttccttcaggatcccaaacatgggcaccactagctctg 4157 Query: 210 ctgaaaacaacaggcaaaggatggtagttatgagcagagtattcttgttcgtattcgata 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4156 ctgaaaacaacaggcaaaggatggtagttatgagcagagtattcttgttcgtattcgata 4097 Query: 270 gtcttggcagacgataagttcaattcagcagtgacaaccatggtatttctctgtattgat 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4096 gtcttggcagacgataagttcaattcagcagtgacaaccatggtatttctctgtattgat 4037 Query: 330 acaattatattattaattcttattgctcattgaataatcaaaaagagatattcaatgtat 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4036 acaattatattattaattcttattgctcattgaataatcaaaaagagatattcaatgtat 3977 Query: 390 gaaccatactgaatctaagtgactacttttaccaaagatgttgaatcgtcttctgttcct 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3976 gaaccatactgaatctaagtgactacttttaccaaagatgttgaatcgtcttctgttcct 3917 Query: 450 cttgtctcttatatatgagaaaaaaaagatccgctttgaaaagttccatgtcatggcata 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3916 cttgtctcttatatatgagaaaaaaaagatccgctttgaaaagttccatgtcatggcata 3857 Query: 510 ttccatgccattacaatttccaaatgacaacttgcgctagctntagtcgaaagtccccgc 569 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 3856 ttccatgccattacaatttccaaatgacaacttgcgctagctttagtcgaaagtccccgc 3797 Query: 570 accgctcgttatcattatcacatagaggatattttgtcactctgtcactgccagaaaacg 629 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3796 accgctcgttatcattatcacatagaggatattttgtcactctgtcactgccagaaaacg 3737 Query: 630 attaacattattccaaagggtagttaagttgaagttaccccgatttatggtctgtgtgaa 689 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 3736 attaacattattccaaagggtagttaagtgaaagttaccccgatttatggtctgtgtgaa 3677 Query: 690 gaacgacagcgcgcgaaactgaattccgggttttgcgcgtagtggactgtgaaaactcgc 749 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 3676 gaacgacagcgcgcgaaactgaattccgggttttgcgcgtagtggactgtgaaacctcgc 3617 Query: 750 tcttcgatgcccttaagggagtgaaccttttccacatataaaaagtggatcttaaagctg 809 |||||||||| |||| |||||||||| ||||| |||||||||||| |||||||||||| Sbjct: 3616 tcttcgatgcacttaggggagtgaactttttcacaatataaaaagtg-atcttaaagctg 3558 Query: 810 ttgggtttgacaaagaaaacaatggaacaggtgctt 845 |||| ||||||||||||||| ||||||||||||||| Sbjct: 3557 ttggttttgacaaagaaaacgatggaacaggtgctt 3522 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7146 Number of Sequences: 1807 Number of extensions: 7146 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 943 length of database: 10,358,551 effective HSP length: 16 effective length of query: 927 effective length of database: 10,329,639 effective search space: 9575575353 effective search space used: 9575575353 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)