BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZF11FM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1744 1289 0.0 >3x_Contig1744 Length = 24119 Score = 1289 bits (650), Expect = 0.0 Identities = 716/730 (98%), Gaps = 6/730 (0%) Strand = Plus / Minus Query: 86 taagtgctcatttacacaaaccttccatcgccaacgtcagacagccatcaatgggtccta 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15913 taagtgctcatttacacaaaccttccatcgccaacgtcagacagccatcaatgggtccta 15854 Query: 146 ctttcggtgtgaaaggtggtgctgcaggtggtgggtatgctcaggttatcccaatggatg 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15853 ctttcggtgtgaaaggtggtgctgcaggtggtgggtatgctcaggttatcccaatggatg 15794 Query: 206 agttcaacatgcatttaactggtgatattcatgcaatcggtgctgctaataacttactag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15793 agttcaacatgcatttaactggtgatattcatgcaatcggtgctgctaataacttactag 15734 Query: 266 cagcagccatagatacaaggatgttccatgaggctactcaaaagaagcacgaaacgtttt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15733 cagcagccatagatacaaggatgttccatgaggctactcaaaagaagcacgaaacgtttt 15674 Query: 326 acaagagattggtccctgttaagaagggtgtcagatcatttacaccatctatgttgacaa 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15673 acaagagattggtccctgttaagaagggtgtcagatcatttacaccatctatgttgacaa 15614 Query: 386 ggttgaacaaattaggaattaacaaaactaatcctgatgatttaaataccgaggaaatta 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15613 ggttgaacaaattaggaattaacaaaactaatcctgatgatttaaataccgaggaaatta 15554 Query: 446 tcaaattcgcacgtctaaacattgacccagacactattactatcaagagggtggttgacg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15553 tcaaattcgcacgtctaaacattgacccagacactattactatcaagagggtggttgacg 15494 Query: 506 tcaacgatagaatgttacgtcaaatcacaattggtcaagcgccaactgaaaagggtttca 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15493 tcaacgatagaatgttacgtcaaatcacaattggtcaagcgccaactgaaaagggtttca 15434 Query: 566 caaggcaaacaggatttgacatcactgtcgcatcagagttgatggcaattttagcgttgt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15433 caaggcaaacaggatttgacatcactgtcgcatcagagttgatggcaattttagcgttgt 15374 Query: 626 ctaatgacttgaaagatttgagagagcgtgtcggacgtattgtaattggctctaactacg 685 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 15373 ctaaggacttgaaagatttgagagagcgtgtcggacgtatcgtaattggctctaactacg 15314 Query: 686 aaaaagaacctattactgttaacgacattggatgtgcaggtggcatttgctgcacttctt 745 ||||||||||||| |||||||||||||||||||||||||||| || |||||||||||| | Sbjct: 15313 aaaaagaacctataactgttaacgacattggatgtgcaggtgcca-ttgctgcacttc-t 15256 Query: 746 aaaggatgcccgtaagccctaaccttgatgcaaccgcttggaaaggacaaccagttttgg 805 |||||||| |||||| ||||||| |||||||| ||||| ||| |||| ||||||||||| Sbjct: 15255 aaaggatg-ccgtaaagcctaacc-tgatgcaaacgctt-gaagggac-accagttttgg 15200 Query: 806 ttcatgctgg 815 |||||||||| Sbjct: 15199 ttcatgctgg 15190 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6388 Number of Sequences: 1807 Number of extensions: 6388 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)