BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZG03FM1.SCF screened BAC_end (984 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1572 1072 0.0 3x_Contig1183 119 1e-26 3x_Contig866 109 1e-23 >3x_Contig1572 Length = 12810 Score = 1072 bits (541), Expect = 0.0 Identities = 546/548 (99%) Strand = Plus / Minus Query: 90 ccacagtaatggtactttgattgtcctctcatacccaatcttcttgttttcaagaatggg 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12024 ccacagtaatggtactttgattgtcctctcatacccaatcttcttgttttcaagaatggg 11965 Query: 150 aacaaggctctgatcaatttaccaagagtggcctgagataagggtttcaactggttttga 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11964 aacaaggctctgatcaatttaccaagagtggcctgagataagggtttcaactggttttga 11905 Query: 210 gcacaagacgccgcgtattgggcaaaaatcctaccgcggcggacgtaagattcagtgtct 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11904 gcacaagacgccgcgtattgggcaaaaatcctaccgcggcggacgtaagattcagtgtct 11845 Query: 270 gtcacacagttgctcattagccatattaaggcatacacttgcctctcgcgttctctgtgc 329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11844 gtcacacagttgctcattagccatattaaggcatacacttgcctctcgcgttctctgtgc 11785 Query: 330 tgttctgccgattgaatttcagatttggcatgcgtagaggtatccatgttgagtacttgg 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11784 tgttctgccgattgaatttcagatttggcatgcgtagaggtatccatgttgagtacttgg 11725 Query: 390 atttcagcatttctaactacagaagcatattcgctcaagggcttatctttgttcttcatt 449 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11724 atttcagcatttctaactacagaagcatattcgctcaagggcttatctttgttcttcatt 11665 Query: 450 gctactaattttaagatattctcctgggttgttcttttcgaagtcacagcagcacccgtc 509 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11664 gctactaattttaagatattctcctgggttgttcttttcgaagtcacagcagcacccgtc 11605 Query: 510 cgtacaggctgcatagcttcgtcaactttctgttttttccagcgttggtcttggtcttgn 569 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11604 cgtacaggctgcatagcttcgtcaactttctgttttttccagcgttggtcttggtcttgt 11545 Query: 570 taaatgaactgttgctgttgctgctgttgttgatgttgatgttgttgatgttgatgttgt 629 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11544 aaaatgaactgttgctgttgctgctgttgttgatgttgatgttgttgatgttgatgttgt 11485 Query: 630 tgatgttg 637 |||||||| Sbjct: 11484 tgatgttg 11477 >3x_Contig1183 Length = 3176 Score = 119 bits (60), Expect = 1e-26 Identities = 103/117 (88%), Gaps = 3/117 (2%) Strand = Plus / Minus Query: 676 tttttttttattttttgtttttttttttattttttttttttttttattttttgttttttt 735 ||||||||| |||||||||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 488 ttttttttttttttttgttttttttttttttttttttttttttttttttttttttttttt 429 Query: 736 tttgagttttttaatttttttnaaatagtttttattttttttttttttttttttttt 792 ||| ||||||| ||||||| | |||||| ||||||||||||||||||||||| Sbjct: 428 ttttttttttttattttttttt---ttgtttttgttttttttttttttttttttttt 375 Score = 107 bits (54), Expect = 4e-23 Identities = 101/117 (86%) Strand = Plus / Minus Query: 676 tttttttttattttttgtttttttttttattttttttttttttttattttttgttttttt 735 ||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 198 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 139 Query: 736 tttgagttttttaatttttttnaaatagtttttattttttttttttttttttttttt 792 ||| |||||| ||||||| | | ||||| ||||||||||||||||||||||| Sbjct: 138 ttttttttttttttttttttttatttttttttttttttttttttttttttttttttt 82 Score = 107 bits (54), Expect = 4e-23 Identities = 101/117 (86%) Strand = Plus / Minus Query: 676 tttttttttattttttgtttttttttttattttttttttttttttattttttgttttttt 735 ||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 202 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 143 Query: 736 tttgagttttttaatttttttnaaatagtttttattttttttttttttttttttttt 792 ||| |||||| ||||||| || ||||| ||||||||||||||||||||||| Sbjct: 142 ttttttttttttttttttttttttttatttttttttttttttttttttttttttttt 86 Score = 107 bits (54), Expect = 4e-23 Identities = 101/117 (86%) Strand = Plus / Minus Query: 676 tttttttttattttttgtttttttttttattttttttttttttttattttttgttttttt 735 ||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 559 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 500 Query: 736 tttgagttttttaatttttttnaaatagtttttattttttttttttttttttttttt 792 ||| |||||| ||||||| | |||||| ||||||||||||||||||||||| Sbjct: 499 tttttttttttttttttttttttttttgttttttttttttttttttttttttttttt 443 >3x_Contig866 Length = 4028 Score = 109 bits (55), Expect = 1e-23 Identities = 107/124 (86%), Gaps = 4/124 (3%) Strand = Plus / Minus Query: 676 tttttttttattttttgtttttttttttattttttttttttttttattttttgttttttt 735 ||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 197 tttttttttttttttttttttttttttttttttttttttttttttgtttttttttttttt 138 Query: 736 tttgagttttttaatttttttnaaatagtttttatttttttttttttttttttttttatt 795 ||| |||||| ||||||| || ||||| ||||||||||||||||||||||| || Sbjct: 137 tttattttttttttttttttt----tattttttttttttttttttttttttttttttttt 82 Query: 796 tatt 799 |||| Sbjct: 81 tatt 78 Score = 107 bits (54), Expect = 4e-23 Identities = 101/117 (86%) Strand = Plus / Minus Query: 676 tttttttttattttttgtttttttttttattttttttttttttttattttttgttttttt 735 ||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 293 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 234 Query: 736 tttgagttttttaatttttttnaaatagtttttattttttttttttttttttttttt 792 ||| |||||| ||||||| | |||||| ||||||||||||||||||||||| Sbjct: 233 tttttttttttttttttttttttttttgttttttttttttttttttttttttttttt 177 Score = 101 bits (51), Expect = 3e-21 Identities = 101/117 (86%), Gaps = 3/117 (2%) Strand = Plus / Minus Query: 676 tttttttttattttttgtttttttttttattttttttttttttttattttttgttttttt 735 ||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||| Sbjct: 215 tttttttttgtttttttttttttttttttttttttttttttttttttttttttttttttt 156 Query: 736 tttgagttttttaatttttttnaaatagtttttattttttttttttttttttttttt 792 |||| |||||| ||||||| || ||||| ||||||||| ||||||||||||| Sbjct: 155 tttgttttttttttttttttt---attttttttttttttttttattttttttttttt 102 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 52,971 Number of Sequences: 1807 Number of extensions: 52971 Number of successful extensions: 12607 Number of sequences better than 1.0e-20: 3 length of query: 984 length of database: 10,358,551 effective HSP length: 16 effective length of query: 968 effective length of database: 10,329,639 effective search space: 9999090552 effective search space used: 9999090552 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)