BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZG06FM1.SCF screened BAC_end (953 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1487 1390 0.0 >3x_Contig1487 Length = 9002 Score = 1390 bits (701), Expect = 0.0 Identities = 832/869 (95%), Gaps = 5/869 (0%) Strand = Plus / Plus Query: 86 aggacctcactctcaatctgtggtaacaaaaaagtatcccagcaccgtcatattatgggg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1024 aggacctcactctcaatctgtggtaacaaaaaagtatcccagcaccgtcatattatgggg 1083 Query: 146 tccgataagagaccacagttgaagaaacagcagaccgaggatgagtccattttgagaggt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1084 tccgataagagaccacagttgaagaaacagcagaccgaggatgagtccattttgagaggt 1143 Query: 206 cggggagcaacaaagaatccttctggatcatcaaatctcttcttcaggagttcatctgca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 cggggagcaacaaagaatccttctggatcatcaaatctcttcttcaggagttcatctgca 1203 Query: 266 tcaaatttatttcggcttcgaaaatcatttgctaatggaggctcgagcagtagtagtaat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1204 tcaaatttatttcggcttcgaaaatcatttgctaatggaggctcgagcagtagtagtaat 1263 Query: 326 tctgctatggtattaaaatcaggacaatcgaagttgaagaacgaggacggtagtgaagtt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1264 tctgctatggtattaaaatcaggacaatcgaagttgaagaacgaggacggtagtgaagtt 1323 Query: 386 tcggatactcatcatatgatcgatgttcttccctcgtttgaaatgtataatgctttacat 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1324 tcggatactcatcatatgatcgatgttcttccctcgtttgaaatgtataatgctttacat 1383 Query: 446 cgcaacatcccacgaggaaatgtaaaccctgaccagcatgatttaccccccagctatcta 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1384 cgcaacatcccacgaggaaatgtaaaccctgaccagcatgatttaccccccagctatcta 1443 Query: 506 taagtggagtcacagcggcaaacgcctgattcatctgacggtaccactgtctcccaactt 565 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1444 gaagtggagtcacagcggcaaacgcctgattcatctgacggtaccactgtctcccaactt 1503 Query: 566 gatgaaatgttcctctccccatcgccttccttatacgatgccaacactcgcgttggatct 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 gatgaaatgttcctctccccatcgccttccttatacgatgccaacactcgcgttggatct 1563 Query: 626 tcacagagccttcatagctttgatacagtatcctcatgggtgttacaaaacagtttacaa 685 |||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 1564 tcacagagccttcaaagcttgaatacagtatcctcaggggtgttacaaaacagtttacaa 1623 Query: 686 gcgttgagtactagatatgtaggcgat-attgacgatttggatgattcagattatataag 744 ||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| Sbjct: 1624 gcgttgagtactagatatg-aggcgataattgacgatttggatgattcagataatataaa 1682 Query: 745 gatcgagaagctatactcggtaccgaaagtgtcaacacctattgacgtttatattcgaat 804 ||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1683 gatcgagaagctatactcgttaccgaaggtgtcaacacctattgacgttaatattcgaat 1742 Query: 805 tctttagaaggctacgaaaccctgcgaaaagtaaactgaggaagagttcctattaaaagg 864 |||| ||||||||||||||||||||||| || || |||||||||||| | ||||||| | Sbjct: 1743 tcttaagaaggctacgaaaccctgcgaagagaaacctgaggaagagtccatattaaagga 1802 Query: 865 atttactttcggggtttttattcaccgggtttgttggtattaga-aattgattttaacat 923 | ||||| ||||| | ||| ||| ||||||||||| || |||| ||| ||| | ||||| Sbjct: 1803 gtatacttccggggatatta-tcaacgggtttgttgtta-tagagaatagatctcaacat 1860 Query: 924 cccctttgattcgaaagttgttacgttac 952 |||||| ||||||||| | ||||||||| Sbjct: 1861 ccccttcgattcgaaatgttttacgttac 1889 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5821 Number of Sequences: 1807 Number of extensions: 5821 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 953 length of database: 10,358,551 effective HSP length: 16 effective length of query: 937 effective length of database: 10,329,639 effective search space: 9678871743 effective search space used: 9678871743 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)