BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZG08RM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1739 1217 0.0 >3x_Contig1739 Length = 22061 Score = 1217 bits (614), Expect = 0.0 Identities = 774/812 (95%), Gaps = 13/812 (1%) Strand = Plus / Plus Query: 44 gctttacattggaaatattcaaatgtttttttctctggattttagttgtttttttttcga 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9440 gctttacattggaaatattcaaatgtttttttctctggattttagttgtttttttttcga 9499 Query: 104 cctttgacgattttctgtattttttcgaaaagttaatagtcaattttgtcttttactagt 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9500 cctttgacgattttctgtattttttcgaaaagttaatagtcaattttgtcttttactagt 9559 Query: 164 atgaaatgccaattgtgtcacgtacagagctgacaattaaacttaaatcatatttatatg 223 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | | Sbjct: 9560 atgaaatgccaattgtgtcacgtacagagctgacaattaaacttaaatcataattaca-g 9618 Query: 224 gttttagaatacatatgaaactccccgaatgttttttttattatattgacaaatgacacg 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9619 gttttagaatacatatgaaactccccgaatgttttttttattatattgacaaatgacacg 9678 Query: 284 acgaaggtccaattttttgctatgtaaaaattatatacatttttgatcgatgaagaaaaa 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9679 acgaaggtccaattttttgctatgtaaaaattatatacatttttgatcgatgaagaaaaa 9738 Query: 344 aagtctctagaagtggacgaatttctgggcaaagattctcatggccatcttcagcgctct 403 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9739 aagtctctagaagtggacgaatttctgggcaaag-ttctcatggccatcttcagcgctct 9797 Query: 404 taccgatcttaatatatttatcattttntatgttttccttaatatcggggtgaagtgcta 463 ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| Sbjct: 9798 taccgatcttaatatatttatcattttttatgttttccttaatatcgtggtgaagtgcta 9857 Query: 464 ttaagtaattatcaaagctttcgaccaactcgatggatttatcctcaaccatcagttggt 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9858 ttaagtaattatcaaagctttcgaccaactcgatggatttatcctcaaccatcagttggt 9917 Query: 524 tcatcacatgagaataat-aggatccacgttaggtctcaatgggacaactgggagatagt 582 |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 9918 tcatcacatgagaataataaggatccacgttaggtctcaatgggacaactggaagatagt 9977 Query: 583 ctatatttatgatttgactccaatttttgatcacattgcgggccttgatattttatatcg 642 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 9978 ctatatttatgatttgactccaatttttgatcacattgcgggccttgata-tttatatcg 10036 Query: 643 gtgtctaaatctggc-acctgcca-cgaatttatccagtttgttgaattggtccctcgta 700 ||||||||||||||| |||||||| ||||| ||||||||| |||| |||||||||||||| Sbjct: 10037 gtgtctaaatctggcaacctgccaccgaatatatccagttggttg-attggtccctcgta 10095 Query: 701 tgataacaattcacgtatttaacataggaattggggtttcattccattccttggaaaaca 760 ||||||||| ||||||| |||||||| || ||| | |||||||| ||| | | ||||| Sbjct: 10096 tgataacaaatcacgta-ttaacataagatttgtgttttcattc--atccataggaaaca 10152 Query: 761 ggattcacctttggaaaattaggtaaacgcc-ccctttatcaattgccgatgacttaaac 819 |||||||| |||||||||||||||| ||| || |||||||||||||||||||| ||| Sbjct: 10153 agattcacc-ttggaaaattaggtaacagccaccatttatcaattgccgatgactagaac 10211 Query: 820 gtactggataaggtttctttttttttgaattg 851 ||||| |||||||||||| | || |||||||| Sbjct: 10212 gtact-gataaggtttctatattattgaattg 10242 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9899 Number of Sequences: 1807 Number of extensions: 9899 Number of successful extensions: 61 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)