BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZG10RM1.SCF screened BAC_end (897 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1738 1094 0.0 >3x_Contig1738 Length = 21411 Score = 1094 bits (552), Expect = 0.0 Identities = 609/621 (98%), Gaps = 6/621 (0%) Strand = Plus / Plus Query: 40 cttctgctgttatcctagttcctgtctcacatcccaacccagctcccagcttcatctgct 99 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18923 cttctgctgttatcctagttcctgtctcacatcccaacccagctcccagcttcatctgct 18982 Query: 100 ttcccatcgtctcatctctctttccaatcacaccacatataaacttcgtctcgagcttcg 159 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18983 ttcccatcgtctcatctctctttccaatcacaccacatataaacttcgtctcgagcttcg 19042 Query: 160 attctttgctttttttgtgcagcaccttctatggaaaaagaaagagcaaggctggtgaaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19043 attctttgctttttttgtgcagcaccttctatggaaaaagaaagagcaaggctggtgaaa 19102 Query: 220 aagaaatattcagcatgggaaatctggcgatgtcatctgacactcgtcgcagcccaacag 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19103 aagaaatattcagcatgggaaatctggcgatgtcatctgacactcgtcgcagcccaacag 19162 Query: 280 aaaacgggtattctagcaagtgtctatggagctaccaccatgcaatacgaagaatcgccg 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19163 aaaacgggtattctagcaagtgtctatggagctaccaccatgcaatacgaagaatcgccg 19222 Query: 340 aatcgtgtttattttgtactgacggtgctttgcatgggtacattttggtatgtatggtct 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19223 aatcgtgtttattttgtactgacggtgctttgcatgggtacattttggtatgtatggtct 19282 Query: 400 ctgggacggaaaaactaaaagtggaacccggaccagatagtatcggaaggatgattgtga 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19283 ctgggacggaaaaactaaaagtggaacccggaccagatagtatcggaaggatgattgtga 19342 Query: 460 tgataatacgttgtgtggttcagttgggtaggtatggctgttgcattat-tatagacaat 518 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 19343 tgataatacgttgtgtggttcagttgggtaggtatggctgttgcattatatatagacaat 19402 Query: 519 atgtctcgnccttttttttgtttttgttttctttggcattgactggttgtactactctta 578 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19403 atgtctcgtccttttttttgtttttgttttctttggcattgactggttgtactactctta 19462 Query: 579 tttg-agagtctcaaggnttagta-tcttcgatcaagatt-aagtngag-aaccctccga 634 |||| |||||||||||| |||||| ||| ||||||||||| |||| ||| ||||||| || Sbjct: 19463 tttgaagagtctcaaggtttagtattctacgatcaagattaaagtagagaaaccctcgga 19522 Query: 635 ttcgggttt-ctaaatgttaa 654 |||| |||| ||||||||||| Sbjct: 19523 ttcgtgtttcctaaatgttaa 19543 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7613 Number of Sequences: 1807 Number of extensions: 7613 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 897 length of database: 10,358,551 effective HSP length: 16 effective length of query: 881 effective length of database: 10,329,639 effective search space: 9100411959 effective search space used: 9100411959 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)