BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC39ZH08RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1735 1068 0.0 >3x_Contig1735 Length = 19486 Score = 1068 bits (539), Expect = 0.0 Identities = 649/674 (96%), Gaps = 9/674 (1%) Strand = Plus / Plus Query: 47 gcttttggacaagggctcgcgaacaaggttttaatagcattgaggaacttaagaattctt 106 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16137 gcttttggacaagg-ctcgcgaacaaggttttaatagcattgaggaacttaagaattctt 16195 Query: 107 tgaaagaagaaattgaaaagaagaaactcgagttaaacagaattgatccactgaaagaat 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16196 tgaaagaagaaattgaaaagaagaaactcgagttaaacagaattgatccactgaaagaat 16255 Query: 167 tggaagactacgaacaaagaaccaaaatgtcatctaacattgctaagtcccgtgtgttta 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 16256 tggaagactacgaacaaagaaccaaaatgtcatctaacattgctaagtcccgtggtccga 16315 Query: 227 ttgatccatctatgccaaaacagccgtttaagactttggacagctttttggatgtggaaa 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16316 ttgatccatctatgccaaaacagccgtttaagactttggacagctttttggatgtggaaa 16375 Query: 287 aagtgaaaaacctctctaaacaagaatgcgaatttctttggagagccagatgggccaata 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16376 aagtgaaaaacctctctaaacaagaatgcgaatttctttggagagccagatgggccaata 16435 Query: 347 aggacaatgtattgaacgctgttgttccaaatcgatatctgggaaaagatcagtgcctta 406 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 16436 aggacaatgtattgaacgctgttgttccaa-tcgatatctgggaaaagatcagtgcctta 16494 Query: 407 gccaaagaaaacccattcttcgttatccctttgccaagagagcgtgcagttgaagaaact 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16495 gccaaagaaaacccattcttcgttatccctttgccaagagagcgtgcagttgaagaaact 16554 Query: 467 gctgctgaatctgcagagaaacaagaatccgccatggnaatgcattacattcagtggcaa 526 ||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||| Sbjct: 16555 gctgctgaatctgcagagaaacaagaaccggccatggaaatgcattacattcagtggcaa 16614 Query: 527 tttgtaggacctaaaaccgtccactgtattatgactactctagcagagtataaa-tgcac 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 16615 tttgtaggacctaaaaccgtccactgtattatgactactctagcagagtataaattgcac 16674 Query: 586 aaag-atttgcaagaactcatactactctacagtttcactttgaatttggccaaggaaaa 644 |||| |||||||||| ||||||||||||||||||| ||| ||| |||||||||||||||| Sbjct: 16675 aaagaatttgcaagacctcatactactctacagttccac-ttggatttggccaaggaaaa 16733 Query: 645 gaacattgttttgatgaacaggccaaggtggaatctgatttttatggtttccctaacaga 704 ||||||||| ||||||||| |||||| || |||||||||| | || ||||||||| ||| Sbjct: 16734 gaacattgtattgatgaac-ggccaa-gttgaatctgattctaat-gtttccctaccag- 16789 Query: 705 aatctcaactattg 718 |||||||||||||| Sbjct: 16790 aatctcaactattg 16803 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9494 Number of Sequences: 1807 Number of extensions: 9494 Number of successful extensions: 91 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)