BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZA03RM1.SCF screened BAC_end (959 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1633 1217 0.0 >3x_Contig1633 Length = 12594 Score = 1217 bits (614), Expect = 0.0 Identities = 636/642 (99%), Gaps = 1/642 (0%) Strand = Plus / Plus Query: 44 cttctaatttgaccgctaagccgcccatcagcattaacattacagatcctttttatagtg 103 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9547 cttctaatttgaccgctaagccgcccatcagcattaacattacagatcctttttatagtg 9606 Query: 104 ctgcagctaaacattttgataaactattccaacgatatggtggtggtactattcaaatat 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9607 ctgcagctaaacattttgataaactattccaacgatatggtggtggtactattcaaatat 9666 Query: 164 taaatctaataaaaacaaaagagaagaatcctcgtgaaacaaaattaggagaataatttg 223 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 9667 taaatctaataaaaacaaaagagaagaatcctcgtgaaacaaaattaggagaagaatttg 9726 Query: 224 aaaggtgtattaaatatttaaaccagtttcttcctgatatcaagaaattagagtacaaag 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9727 aaaggtgtattaaatatttaaaccagtttcttcctgatatcaagaaattagagtacaaag 9786 Query: 284 catgggatatgagcaaagcatcaaaatctcatggtcagatggtgattgagtttttagaaa 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9787 catgggatatgagcaaagcatcaaaatctcatggtcagatggtgattgagtttttagaaa 9846 Query: 344 aatatgcaaaggaaactgtggagactactggtatctttcataatggaaaagattttcagt 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9847 aatatgcaaaggaaactgtggagactactggtatctttcataatggaaaagattttcagt 9906 Query: 404 caacatctgtacaagagggtgtttgcagaacaaattgtattgactgcttagatagaacaa 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9907 caacatctgtacaagagggtgtttgcagaacaaattgtattgactgcttagatagaacaa 9966 Query: 464 atgcagctcagtttgtcattggaaaacgtgctcttggtgaacaactacatgcaatgggaa 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9967 atgcagctcagtttgtcattggaaaacgtgctcttggtgaacaactacatgcaatgggaa 10026 Query: 524 ttatcgaagaaaagtttttagaatacgattcggacatcgttaacatttttgactgaatta 583 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 10027 ttatcgaagaaaagtttttagaatacgattcggacatcgttaaca-ttttgactgaatta 10085 Query: 584 ttccatgaccacggtgataccattgccttacaatatgggggctcccatttggtgaacaca 643 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10086 ttccatgaccacggtgataccatagccttacaatatgggggctcccatttggtgaacaca 10145 Query: 644 atggatacttatagaaaaatcaatcattggacctcacattct 685 ||||| |||||||||||||||||||| |||| |||||||||| Sbjct: 10146 atggagacttatagaaaaatcaatcaatggagctcacattct 10187 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 10,095 Number of Sequences: 1807 Number of extensions: 10095 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 959 length of database: 10,358,551 effective HSP length: 16 effective length of query: 943 effective length of database: 10,329,639 effective search space: 9740849577 effective search space used: 9740849577 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)