BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZA05FM1.SCF screened BAC_end (910 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1617 971 0.0 >3x_Contig1617 Length = 15119 Score = 971 bits (490), Expect = 0.0 Identities = 555/574 (96%), Gaps = 2/574 (0%) Strand = Plus / Minus Query: 179 ggtagttttgaggaattgaatctacatttgagggatcacactttcgttttgggtactgct 238 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15060 ggtagttttgaggaattgaatctacatttgagggatcacactttcgttttgggtactgct 15001 Query: 239 caaccaaccgtctccgatgttacattgttcgaacatgttttaccagttgccaaggagttg 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15000 caaccaaccgtctccgatgttacattgttcgaacatgttttaccagttgccaaggagttg 14941 Query: 299 atcaactcttctaaagatgtcaagggtaactatgctaagtacagacatattcttagatgg 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14940 atcaactcttctaaagatgtcaagggtaactatgctaagtacagacatattcttagatgg 14881 Query: 359 tcacaatacttgaacgatttattacaattgaacgacttgactttgaacattgatttggat 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14880 tcacaatacttgaacgatttattacaattgaacgacttgactttgaacattgatttggat 14821 Query: 419 cttccacgtgaagtcatcgaaaagaagaagaaggaagataagaaggacgaggctgaagct 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14820 cttccacgtgaagtcatcgaaaagaagaagaaggaagataagaaggacgaggctgaagct 14761 Query: 479 tccaagaagggcggtgaagcagcagcaaagaaggatggtaaggccgataaacaaccaaag 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14760 tccaagaagggcggtgaagcagcagcaaagaaggatggtaaggccgataaacaaccaaga 14701 Query: 539 agtaagccagatgaagatactttaaagaaattgagagaagaagctaaggcaaagaaagct 598 |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 14700 ggtaagccagatgaagaaactttaaagaaattgagagaagaagctaaggcaaagaaggct 14641 Query: 599 gccaagaaagccgccaatgccccacaagccc-agcaccaaccaaagagtctgccaaacca 657 |||||||| ||||||||||||| |||||||| ||||||| || ||||||||||||||||| Sbjct: 14640 gccaagaaggccgccaatgcccaacaagcccaagcaccagcccaagagtctgccaaacca 14581 Query: 658 tcttcaggtgtaattgatttccgtgtttggtttcatttcaaaagctatcaagcttccaaa 717 ||| ||||||||||||||||||||| ||||||||||| ||| |||||||||| |||| | Sbjct: 14580 tctccaggtgtaattgatttccgtg-ttggtttcattcaaaaggctatcaagcatccaga 14522 Query: 718 tgctgactctttatatgtttctaccatccatgtt 751 |||||||||| ||||||||||||||||| ||||| Sbjct: 14521 tgctgactctctatatgtttctaccatcgatgtt 14488 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7960 Number of Sequences: 1807 Number of extensions: 7960 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 910 length of database: 10,358,551 effective HSP length: 16 effective length of query: 894 effective length of database: 10,329,639 effective search space: 9234697266 effective search space used: 9234697266 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)