BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZA10RM1.SCF screened BAC_end (1133 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1630 432 e-121 >3x_Contig1630 Length = 14771 Score = 432 bits (218), Expect = e-121 Identities = 235/242 (97%) Strand = Plus / Plus Query: 90 gcttctanatccggctacatataaatccactgcgggggatgcagcaaccaaaattcatta 149 ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9438 gcttctagatccgtctacatataaatccactgcgtgggatgcagcaaccaaaattcatta 9497 Query: 150 cgatagtaaaatggttaaacaattcgatagctacgaaggtgaattagatgcacgtctgct 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9498 cgatagtaaaatggttaaacaattcgatagctacgaaggtgaattagatgcacgtctgct 9557 Query: 210 taaaaatattacctccaattnctcatctgaaacgttccctattcagaccattctattcga 269 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9558 taaaaatattacctccaatttctcatctgaaacgttccctattcagaccattctattcga 9617 Query: 270 taaagngctcccgctnctaaactcatcttttaaagcaaacagaaaacctttcacaagacg 329 ||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 9618 taaagtgctcccgcttctaaactcatcttttaaagcaaacagaaaacttttcacaagacg 9677 Query: 330 ag 331 || Sbjct: 9678 ag 9679 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4884 Number of Sequences: 1807 Number of extensions: 4884 Number of successful extensions: 27 Number of sequences better than 1.0e-20: 1 length of query: 1133 length of database: 10,358,551 effective HSP length: 16 effective length of query: 1117 effective length of database: 10,329,639 effective search space: 11538206763 effective search space used: 11538206763 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)