BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZA11FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1091 775 0.0 >3x_Contig1091 Length = 4701 Score = 775 bits (391), Expect = 0.0 Identities = 459/479 (95%), Gaps = 2/479 (0%) Strand = Plus / Plus Query: 83 gaacgttctcacgttaaaaaattcgttttaccataacgaggaaaagttttgtatcccgtg 142 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 gaacgttctcacgttaaaaaattcgttttaccataacgaggaaaagttttgtatcccgtg 490 Query: 143 ttgttctaagaaatgataatattttggtgaaaattgtgctagttgtattgctcacgctgg 202 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 491 ttgttctaagaaatgataatatgctggtgaaaattgtgctagttgtattgctcacgctgg 550 Query: 203 cgttatttttataaatttttagcacgatatcattgccaattacaatcggtttgtatatct 262 ||||| | || || |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 551 cgttagtatttgaatgttttagcacgatatcagtgccaattacaatcggtttgtatatct 610 Query: 263 ctgaatataacgggtatcggttcggagttttcggatggtgtaaggtggatagatctgttt 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 ctgaatataacgggtatcggttcggagttttcggatggtgtaaggtggatagatctgttt 670 Query: 323 gctcacccattaggatagggtattcaaaggatgacattcttttgtttaacgaacaagaat 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 gctcacccattaggatagggtattcaaaggatgacattcttttgtttaacgaacaagaat 730 Query: 383 atctgcatgtgccgaaccatgcgaaatatgcattatcaaatttactattggttcacgttt 442 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 731 atctgcatctgccgaaccatgcgaaatatgcattatcaaatttactattggttcacgttt 790 Query: 443 tggcatttgtatgcgtaactatcctttgggtatttggaatgttgacatgttttccgttgc 502 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 791 tggcatttgtatgcgtaactatcctttgggtatttggaatgttgacatg-tttccgttgc 849 Query: 503 ataaagacttccagaccaattgttgataatagctgggctatgggctaagcctacattta 561 |||||||| || |||| || ||||||| ||||||| ||||||| ||| || |||||||| Sbjct: 850 ataaagacgtcgagacgaa-tgttgatcatagctgtgctatggtctatgcttacattta 907 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5888 Number of Sequences: 1807 Number of extensions: 5888 Number of successful extensions: 30 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)