BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZA12RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1046 700 0.0 >3x_Contig1046 Length = 3637 Score = 700 bits (353), Expect = 0.0 Identities = 411/425 (96%), Gaps = 4/425 (0%) Strand = Plus / Plus Query: 208 gtaactattacctgacaattacctgatttggaaatgatatgagaaaagccgttaccttaa 267 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gtaactagtacctgacaattacctgatttggaaatgatatgagaaaagccgttaccttaa 60 Query: 268 attatatgttggttttccagcattcaataatggtccggttttctctataatgaagcaatg 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 attatatgttggttttccagcattcaataatggtccggttttctctataatgaagcaatg 120 Query: 328 cttgtgcttggtgcatgaaattgatattgatattaccaactccaaactttaaagtggtac 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cttgtgcttggtgcatgaaattgatattgatattaccaactccaaactttaaagtggtac 180 Query: 388 ctgatttttatacgtatggtaggatgataatactacccagcggtaataatgactattaac 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctgatttttatacgtatggtaggatgataatactacccagcggtaataatgactattaac 240 Query: 448 atatgcagaaatgatcaggaaactagcatgatatttgtttgttcagt-aacgatgctgtg 506 ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct: 241 atatgcagaaatgatcaggaaactagcatgatatttg-ttgttcagtaaacgatgctgtg 299 Query: 507 acatctgtaacctattaagcgagtaagtttgcatataaaaagccttcatgatgtgatacc 566 ||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 300 acatctgtaacctatcaagcgagtaag-ttgcatataaaaaggcttcatgatgtgatacc 358 Query: 567 ttccagacctggtgcctagtatgtttcatgtcccataactttatt-tttgaagctttttg 625 ||| |||||||||| |||||||||||||| |||||||||||| |||||||||||||| Sbjct: 359 ttcaggacctggtgctaggtatgtttcatgtcacataactttattatttgaagctttttg 418 Query: 626 gttta 630 |||| Sbjct: 419 tttta 423 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 12,831 Number of Sequences: 1807 Number of extensions: 12831 Number of successful extensions: 91 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)