BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZB04RM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1686 880 0.0 >3x_Contig1686 Length = 15382 Score = 880 bits (444), Expect = 0.0 Identities = 470/476 (98%), Gaps = 2/476 (0%) Strand = Plus / Plus Query: 48 tttgagtaacttccttccgatagtaatagatgaaatattatagtaccttctatatcataa 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14587 tttgagtaacttccttccgatagtaatagatgaaatattatagtaccttctatatcataa 14646 Query: 108 atttagggatttgtttttttgtactttcggtattgtgtcaacattaccgttaaaaatatg 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14647 atttagggatttgtttttttgtactttcggtattgtgtcaacattaccgttaaaaatatg 14706 Query: 168 tgcatctttgtggcgaggaataaaaagaaatttaaagtttgacggcaaagaagcgtcagt 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14707 tgcatctttgtggcgaggaataaaaagaaatttaaagtttgacggcaaagaagcgtcagt 14766 Query: 228 ttcctgaaagagtgataatatggtaagatacttcagaaagtgataggaaggtgaatcagt 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14767 ttcctgaaagagtgataatatggtaagatacttcagaaagtgataggaaggtgaatcagt 14826 Query: 288 tacactttaatttcctctgacaatctaacacaaataatataagatttcctcctattcaat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14827 tacactttaatttcctctgacaatctaacacaaataatataagatttcctcctattcaat 14886 Query: 348 ttactacctgctcgtcttgttcttttgatcactttatcagactattctatttcctcaaaa 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14887 ttactacctgctcgtcttgttcttttgatcactttatcagactattctatttcctcaaaa 14946 Query: 408 ggcaaggtcattgtgagaagtttacaatgcaaaaaatctatttgttttaatcagtaagat 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14947 ggcaaggtcattgtgagaagtttacaatgcaaaaaatctatttgttttaatcagtaagat 15006 Query: 468 tgggcaaattttcgggccgt-agcctttaccctgtcatttaatttgcataatatgc 522 ||||||||||||| |||||| |||||||||| |||||||||| ||||||||||| Sbjct: 15007 tgggcaaattttc-ggccgtaagcctttacctgttcatttaattcgcataatatgc 15061 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9070 Number of Sequences: 1807 Number of extensions: 9070 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)