BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZB06RM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1581 1346 0.0 >3x_Contig1581 Length = 11429 Score = 1346 bits (679), Expect = 0.0 Identities = 773/794 (97%), Gaps = 8/794 (1%) Strand = Plus / Minus Query: 45 gctttaacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaata 104 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6004 gctttaacagaatgcaccaaggaaactggaatcaaagatgtggatttatgagaggtaata 5945 Query: 105 tgccctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggt 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5944 tgccctacaaattggaaaatacccattgggaaagttgtataccatatgactttagatggt 5885 Query: 165 accaggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtttaatt 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5884 accaggaaagtgtttaatatgcatctcgaaaatgatccattcaaataagtgggtagaatt 5825 Query: 225 ccttccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgc 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5824 ccttccgggaagtttagaactgtattcttcaattttgatgaagatacctgtggtgcatgc 5765 Query: 285 aaatagttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaat 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5764 aaatagttagcaaacgttacaaacgcgagacatagcgatgcgcttagaaggaactgcaat 5705 Query: 345 tccgttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaa 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5704 tccgttaaaccaacaggatgtggaaatcgggataaaatggcttttgacaggtttgatgaa 5645 Query: 405 acagaagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggt 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5644 acagaagaagtcatataccatataaggcataaaatagatatgtgaacattcacttccggt 5585 Query: 465 aaatactcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattn 524 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5584 aaatactcttgtacatccttgggaaatagattgacaaattgctctttccacgtctgattt 5525 Query: 525 tgcagtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctgg 584 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5524 tgcagtcttctgacctcattgaacgaagttgaatgtttatgagacctgtaattttcctgg 5465 Query: 585 aacggtatttgtacctggttgacaaagttaacatctgaaaatgttttattgatcgaagga 644 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5464 aacggtatttgtacctggttgacaaagttaacatctgaaaatgttttattgatcgaagga 5405 Query: 645 cggcgccttcgaagtgacgctcttggaagttacaaactatttttcgcttattttattcac 704 ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 5404 cggcg-cttcgaagtgacgctcttggaagttacaatc-atttttcgcttattttattcac 5347 Query: 705 acctttttaaaatcaataaaacgagtggtacgaaggtgaattgaaaataatttagcaaac 764 ||||| |||||||||||||| ||||||| |||||| |||| ||| ||||||||||||||| Sbjct: 5346 accttcttaaaatcaataaagcgagtggaacgaagttgaa-tgagaataatttagcaaac 5288 Query: 765 gattggaatagatcgaaaaggaactgttactttatgggagcgagccatcgatttttagag 824 || | |||||||||||||| ||||||||||||||| |||||||| || ||| |||||||| Sbjct: 5287 ga-tagaatagatcgaaaa-gaactgttactttat-ggagcgag-cagcga-ttttagag 5233 Query: 825 cccactgtccctat 838 || |||||| |||| Sbjct: 5232 ccgactgtcactat 5219 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,590 Number of Sequences: 1807 Number of extensions: 14590 Number of successful extensions: 198 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)