BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZB08RM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1620 839 0.0 >3x_Contig1620 Length = 12263 Score = 839 bits (423), Expect = 0.0 Identities = 451/455 (99%), Gaps = 4/455 (0%) Strand = Plus / Plus Query: 43 gcttctggttgaacttcgagattgccaggaattgtactcttacaccttttaacatattcg 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1946 gcttctggttgaacttcgagattgccaggaattgtactcttacaccttttaacatattcg 2005 Query: 103 tctaattcgctctctgccattttttcattattaacaatccaaaggccttccacagaagca 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2006 tctaattcgctctctgccattttttcattattaacaatccaaaggccttccacagaagca 2065 Query: 163 gaagtccctcgttctccaggtttattgctgtacggatcttccacccattgttgattacaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2066 gaagtccctcgttctccaggtttattgctgtacggatcttccacccattgttgattacaa 2125 Query: 223 ttactccattggcccttttgtaaacttactctactttttttccatgggaatggtgcgata 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2126 ttactccattggcccttttgtaaacttactctactttttttccatgggaatggtgcgata 2185 Query: 283 tagtcgtcaaataatggatcacctaaatgattgcacatgtcttctcccagatactggaac 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2186 tagtcgtcaaataatggatcacctaaatgattgcacatgtcttctcccagatactggaac 2245 Query: 343 caccaattttctctgtttgtattgaaatctctgatagaagccaaactttctgttagcctt 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2246 caccaattttctctgtttgtattgaaatctctgatagaagccaaactttctgttagcctt 2305 Query: 403 tcaaccgaactttctattccttcccattctttgtccctcgtgatgtgctctttggttgtt 462 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2306 tcaaccgaactttctattccttcccattctttgtccctcgtgatgtgctc-ttggttgtt 2364 Query: 463 cttgcttttccgacacaatttgaaccaaatccaaa 497 | ||| |||||||||||||||||| |||||||||| Sbjct: 2365 c-tgc-tttccgacacaatttgaa-caaatccaaa 2396 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,853 Number of Sequences: 1807 Number of extensions: 14853 Number of successful extensions: 74 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)