BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZB09RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1738 1003 0.0 >3x_Contig1738 Length = 21411 Score = 1003 bits (506), Expect = 0.0 Identities = 563/578 (97%), Gaps = 3/578 (0%) Strand = Plus / Minus Query: 46 ctttaaacgattcttcttccacaatggtagtttgaaccacttctgaatttgggaagacac 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16940 ctttaaacgattcttcttccacaatggtagtttgaaccacttctgaatttgggaagacac 16881 Query: 106 cccatgtgacagcattggagcttttaggttgtaggttagtttcgaagtaacccgtataat 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16880 cccatgtgacagcattggagcttttaggttgtaggttagtttcgaagtaacccgtataat 16821 Query: 166 cacccaagtaataactaaactcaccgttcttgctttcaatctttggtttgagaacctgat 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16820 cacccaagtaataactaaactcaccgttcttgctttcaatctttggtttgagaacctgat 16761 Query: 226 tccattcttcctttcgaacaaatatttctacaaaggccttttgatagattaaaccattgg 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16760 tccattcttcctttcgaacaaatatttctacaaaggccttttgatagattaaaccattgg 16701 Query: 286 caggtccccatccgaagatattatcagtactttgtgatccatttgttgcaggttgtgagg 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16700 caggtccccatccgaagatattatcagtactttgtgatccatttgttgcaggttgtgagg 16641 Query: 346 ccaaggaaaggtatccacgttggttcaactctataagttcttcttgaatgaatgcggttt 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16640 ccaaggaaaggtatccacgttggttcaactctataagttcttcttgaatgaatgcggttt 16581 Query: 406 cagcagaaagtccaagatctgaccatggtagtgccttcattgagccctcaaagtatcgta 465 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 16580 cagcagaaagtccaagatctgaccatggtagtgccttcattgagccctcaaggtatcgta 16521 Query: 466 tgaaaatgtttttgatatccttcaaagaaaccggatgatcccaaagtt-gtatgccgtgc 524 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 16520 tgaaaatgtttttgatatcctccaaagaaaccggatgatcccaaagttcgtatgccgtgc 16461 Query: 525 tgttacaaactttaagcgatggttcgtacccataaattt-accgtacgcggaaaattttg 583 ||||||||||||| ||||||||| ||||||||| ||||| ||||||||||| | || | | Sbjct: 16460 tgttacaaactttgagcgatggtccgtacccatcaatttcaccgtacgcgggagatctcg 16401 Query: 584 aattaccgaattatacggttgggaaactcatcccaagt 621 ||| |||||| | ||| ||||||||||||||||||||| Sbjct: 16400 aatcaccgaa-tctaccgttgggaaactcatcccaagt 16364 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,392 Number of Sequences: 1807 Number of extensions: 14392 Number of successful extensions: 141 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)