BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZC02RM1.SCF screened BAC_end (864 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig290 1592 0.0 >3x_Contig290 Length = 1717 Score = 1592 bits (803), Expect = 0.0 Identities = 815/819 (99%) Strand = Plus / Plus Query: 46 tctgatggtatcaaccaatttagcaggatttctgtgaataccatgccagacaccgttaac 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95 tctgatggtatcaaccaatttagcaggatttctgtgaataccatgccagacaccgttaac 154 Query: 106 aaaaactcttgtagcatctggagattgatgaggtatgtaatcttctaacggttccatacc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 155 aaaaactcttgtagcatctggagattgatgaggtatgtaatcttctaacggttccatacc 214 Query: 166 ccattcattcaagaaggtgataattggcaggggatcagtaccaacagaaatacaagacat 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 ccattcattcaagaaggtgataattggcaggggatcagtaccaacagaaatacaagacat 274 Query: 226 caaggacaagttcttaacaagaccacatgcttgaccttcaggtgtttctgcgggacaaac 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 caaggacaagttcttaacaagaccacatgcttgaccttcaggtgtttctgcgggacaaac 334 Query: 286 caaaccccaatgtgtattatgcaattgacgaggcttggctaacttaccatcacggccgat 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 caaaccccaatgtgtattatgcaattgacgaggcttggctaacttaccatcacggccgat 394 Query: 346 tggcgtatttgttcttctaagatgagatagtgttgacgaataagtataacggtttaaaac 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 tggcgtatttgttcttctaagatgagatagtgttgacgaataagtataacggtttaaaac 454 Query: 406 ttgagaaacaccagctctagacgacatcgacttcttttgttcaccccagttaccagtagc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 ttgagaaacaccagctctagacgacatcgacttcttttgttcaccccagttaccagtagc 514 Query: 466 caaagcatacttaagaccggcggtaatggtagtggccttgacagccaatttaagattgaa 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 caaagcatacttaagaccggcggtaatggtagtggccttgacagccaatttaagattgaa 574 Query: 526 gtctttagcttcttcaacagatctttgcataaaacgtagaatatctcttgttaattttct 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 gtctttagcttcttcaacagatctttgcataaaacgtagaatatctcttgttaattttct 634 Query: 586 gaacaaagtcttgaacaattgagctaacaaaggtcctgccaaatccaatcttttcttacc 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 635 gaacaaagtcttgaacaattgagctaacaaaggtcctgccaaatccaatcttttcttacc 694 Query: 646 gaagtggtcacggtcatcttgatccttacggtctaaagcacaaagcaatagtctattaat 705 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 695 gaagtggtcacggtcatcttgatccttacggtctaaagcacaaagcaatagtctattaat 754 Query: 706 catataacctaagaagaaagcttttctgctttcaaaaccttccaattgggtaatatgaag 765 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 755 catataacctaagaagaaagcttttctgctttcaaaaccttccaattgggtaatatgagg 814 Query: 766 taaaaattcctttttgtaaatatctttggcgtactggattcttttctccttcttgatacc 825 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 taaaaattccttttgtaaaatatctttggcgtactggattcttttctccttcttgatacc 874 Query: 826 caaagctgtaccacgacgaccaatgaaatccaaagctgt 864 ||||||||||||||||||||||||||||||||||||||| Sbjct: 875 caaagctgtaccacgacgaccaatgaaatccaaagctgt 913 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6762 Number of Sequences: 1807 Number of extensions: 6762 Number of successful extensions: 53 Number of sequences better than 1.0e-20: 1 length of query: 864 length of database: 10,358,551 effective HSP length: 16 effective length of query: 848 effective length of database: 10,329,639 effective search space: 8759533872 effective search space used: 8759533872 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)