BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC3ZC02RM1.SCF screened BAC_end
         (864 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig290                                                         1592   0.0  

>3x_Contig290 
          Length = 1717

 Score = 1592 bits (803), Expect = 0.0
 Identities = 815/819 (99%)
 Strand = Plus / Plus

                                                                       
Query: 46  tctgatggtatcaaccaatttagcaggatttctgtgaataccatgccagacaccgttaac 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95  tctgatggtatcaaccaatttagcaggatttctgtgaataccatgccagacaccgttaac 154

                                                                       
Query: 106 aaaaactcttgtagcatctggagattgatgaggtatgtaatcttctaacggttccatacc 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 aaaaactcttgtagcatctggagattgatgaggtatgtaatcttctaacggttccatacc 214

                                                                       
Query: 166 ccattcattcaagaaggtgataattggcaggggatcagtaccaacagaaatacaagacat 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 ccattcattcaagaaggtgataattggcaggggatcagtaccaacagaaatacaagacat 274

                                                                       
Query: 226 caaggacaagttcttaacaagaccacatgcttgaccttcaggtgtttctgcgggacaaac 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 caaggacaagttcttaacaagaccacatgcttgaccttcaggtgtttctgcgggacaaac 334

                                                                       
Query: 286 caaaccccaatgtgtattatgcaattgacgaggcttggctaacttaccatcacggccgat 345
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caaaccccaatgtgtattatgcaattgacgaggcttggctaacttaccatcacggccgat 394

                                                                       
Query: 346 tggcgtatttgttcttctaagatgagatagtgttgacgaataagtataacggtttaaaac 405
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tggcgtatttgttcttctaagatgagatagtgttgacgaataagtataacggtttaaaac 454

                                                                       
Query: 406 ttgagaaacaccagctctagacgacatcgacttcttttgttcaccccagttaccagtagc 465
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 ttgagaaacaccagctctagacgacatcgacttcttttgttcaccccagttaccagtagc 514

                                                                       
Query: 466 caaagcatacttaagaccggcggtaatggtagtggccttgacagccaatttaagattgaa 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 caaagcatacttaagaccggcggtaatggtagtggccttgacagccaatttaagattgaa 574

                                                                       
Query: 526 gtctttagcttcttcaacagatctttgcataaaacgtagaatatctcttgttaattttct 585
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 gtctttagcttcttcaacagatctttgcataaaacgtagaatatctcttgttaattttct 634

                                                                       
Query: 586 gaacaaagtcttgaacaattgagctaacaaaggtcctgccaaatccaatcttttcttacc 645
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 gaacaaagtcttgaacaattgagctaacaaaggtcctgccaaatccaatcttttcttacc 694

                                                                       
Query: 646 gaagtggtcacggtcatcttgatccttacggtctaaagcacaaagcaatagtctattaat 705
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gaagtggtcacggtcatcttgatccttacggtctaaagcacaaagcaatagtctattaat 754

                                                                       
Query: 706 catataacctaagaagaaagcttttctgctttcaaaaccttccaattgggtaatatgaag 765
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 755 catataacctaagaagaaagcttttctgctttcaaaaccttccaattgggtaatatgagg 814

                                                                       
Query: 766 taaaaattcctttttgtaaatatctttggcgtactggattcttttctccttcttgatacc 825
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 taaaaattccttttgtaaaatatctttggcgtactggattcttttctccttcttgatacc 874

                                                  
Query: 826 caaagctgtaccacgacgaccaatgaaatccaaagctgt 864
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 875 caaagctgtaccacgacgaccaatgaaatccaaagctgt 913


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6762
Number of Sequences: 1807
Number of extensions: 6762
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 864
length of database: 10,358,551
effective HSP length: 16
effective length of query: 848
effective length of database: 10,329,639
effective search space: 8759533872
effective search space used: 8759533872
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)