BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZC09RM1.SCF screened BAC_end (941 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig715 1251 0.0 >3x_Contig715 Length = 2727 Score = 1251 bits (631), Expect = 0.0 Identities = 689/703 (98%), Gaps = 4/703 (0%) Strand = Plus / Plus Query: 46 cttcttatctgaagctacgggctttgtcgtgaaaatgtcgcaaccacctgtgatactgca 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1029 cttcttatctgaagctacgggctttgtcgtgaaaatgtcgcaaccacctgtgatactgca 1088 Query: 106 gtccgaggtctcgaaattaagagcctggttaacaacctctaaatcaaattcatcgataaa 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1089 gtccgaggtctcgaaattaagagcctggttaacaacctctaaatcaaattcatcgataaa 1148 Query: 166 ctttaaaagatgttaagtaacacatgatgcaaaaaatatacatacatgccgttaatataa 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 ctttaaaagatgttaagtaacacatgatgcaaaaaatatacatacatgccgttaatataa 1208 Query: 226 ggttagtattccgtttgttcattatgaatatgtcagaactatattaaaacacgattattc 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1209 ggttagtattccgtttgttcattatgaatatgtcagaactatattaaaacacgattattc 1268 Query: 286 gcataccttcattattgcaggttaattggaagcggtgaaacgtttgaaaataaaacagta 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 gcataccttcattattgcaggttaattggaagcggtgaaacgtttgaaaataaaacagta 1328 Query: 346 ttcttgagagctcaaagacacactgtgctagattcaactaaattgacggcctcctatcaa 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1329 ttcttgagagctcaaagacacactgtgctagattcaactaaattgacggcctcctatcaa 1388 Query: 406 gcttgttatggttggctgttcgaaaactcattgtaagggcagcgttatcggtctttgtga 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1389 gcttgttatggttggctgttcgaaaactcattgtaagggcagcgttatcggtctttgtga 1448 Query: 466 taatttcaactcagcacatgttacttcgagaaacgggaacgcgcattaaaaggtcgggta 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1449 taatttcaactcagcacatgttacttcgagaaacgggaacgcgcattaaaaggtcgggta 1508 Query: 526 accctcagttatgatgccacagctaagtgagttgaaagcagacagcaccattgaacagaa 585 |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1509 accctcagttatgaggccacagctaggtgagttgaaagcagacagcaccattgaacagaa 1568 Query: 586 gctaccattttcaagctaacattgacattctatatttcaaaagaagttgctttatgtatg 645 |||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||| Sbjct: 1569 gctaccatctccaagctaacattgacattctatagtcaaaaagaagttgctttatgtatg 1628 Query: 646 ttcctgtatgtacaaatccgtggcaaccacaactttttatgcggttaagaatttaaggta 705 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||| Sbjct: 1629 ttcctgtatgtacaaatccgtggcaaccacaactttttatgcggtaaagaa-ttaaagta 1687 Query: 706 ttatgaaatttagaaaattaatgttactattgtgaaataaatg 748 |||||| | |||| ||||||||||||||| ||||||||||||| Sbjct: 1688 ttatgata-ttag-aaattaatgttacta-tgtgaaataaatg 1727 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8836 Number of Sequences: 1807 Number of extensions: 8836 Number of successful extensions: 88 Number of sequences better than 1.0e-20: 1 length of query: 941 length of database: 10,358,551 effective HSP length: 16 effective length of query: 925 effective length of database: 10,329,639 effective search space: 9554916075 effective search space used: 9554916075 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)