BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZD05FM1.SCF screened BAC_end (869 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1216 1205 0.0 >3x_Contig1216 Length = 5132 Score = 1205 bits (608), Expect = 0.0 Identities = 669/683 (97%), Gaps = 5/683 (0%) Strand = Plus / Minus Query: 92 gtcctgtttgtagagcacctttaccaccactttagaggccattgccattatgtcgtagca 151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2121 gtcctgtttgtagagcacctttaccaccactttagaggccattgccattatgtcgtagca 2062 Query: 152 tggacagtgtcacgtttgcagccttttctatacgcagtataatttttaaccttaaattat 211 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2061 tggacagtgtcacgtttgcagccttttctatacgcagtataatttttaaccttaaattat 2002 Query: 212 gaaaatgacattatgattcataacttcaaatactcacttatcttgcacaacaacgaagat 271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2001 gaaaatgacattatgattcataacttcaaatactcacttatcttgcacaacaacgaagat 1942 Query: 272 aggaaaaagcagagaacaagcaccaccagtaattgcaatcatgactattaggcatccaca 331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1941 aggaaaaagcagagaacaagcaccaccagtaattgcaatcatgactattaggcatccaca 1882 Query: 332 aaggtatgaatgagtatatcctacttatacaataatttaattccttttaaccgggctgat 391 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1881 aaggtatgaatgagtatatcctacttatacaataatttaattccttttaaccgggctgat 1822 Query: 392 actaactgatcgtattggatctatatttttagcgtcaaagcatgcctgttcgacatggat 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1821 actaactgatcgtattggatctatatttttagcgtcaaagcatgcctgttcgacatggat 1762 Query: 452 ggcttgttaataaacaccgaagacatgtacactgttgctataaataaggtcttggaggca 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1761 ggcttgttaataaacaccgaagacatgtacactgttgctataaataaggtcttggaggca 1702 Query: 512 catgacaaaggtactatgtcttgngatctgaagttgcagttgcaaggtttgcctggtcca 571 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1701 catgacaaaggtactatgtcttgggatctgaagttgcagttgcaaggtttgcctggtcca 1642 Query: 572 gaagctggccgtaaggttattgaatattatgatttacctttgtcattcgaagaaattgat 631 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1641 gaagctggccgtaaggttattgaatattatgatttacctttgtcattcgaagaatttgat 1582 Query: 632 acgttgaataggaaacatcagggcattctgtggccaacgagcaaatttctccctggaaca 691 |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1581 acgttgaataggaaacatcaggcaatcctgtggccaacgagcaaatttctccctggaaca 1522 Query: 692 ttagagctttattgcttaccttaagggaaggaacgtttccaattgcgctcttgcacctct 751 ||||||| ||||||||||| | |||| |||||||| |||||||||||||| |||||||| Sbjct: 1521 ttagagc-ttattgcttacttaaaggaaaggaacg-ttccaattgcgctc-tgcacctc- 1466 Query: 752 ttccactggtaaaaaagttccat 774 ||||||| ||| ||||||||||| Sbjct: 1465 ttccact-gtagaaaagttccat 1444 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5747 Number of Sequences: 1807 Number of extensions: 5747 Number of successful extensions: 41 Number of sequences better than 1.0e-20: 1 length of query: 869 length of database: 10,358,551 effective HSP length: 16 effective length of query: 853 effective length of database: 10,329,639 effective search space: 8811182067 effective search space used: 8811182067 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)