BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZE01RM1.SCF screened BAC_end (981 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1599 1178 0.0 >3x_Contig1599 Length = 10178 Score = 1178 bits (594), Expect = 0.0 Identities = 654/666 (98%), Gaps = 6/666 (0%) Strand = Plus / Minus Query: 78 cttcccaat-gggtgaaaccttttcttggaaaga-atctgaatcctggatcattgaacat 135 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6268 cttcccaattgggtgaaaccttttcttggaaagatatctgaatcctggatcattgaacat 6209 Query: 136 tcagtggtcgataccaagaagggagaaatgctgacttatactaggaatttagatcatacg 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6208 tcagtggtcgataccaagaagggagaaatgctgacttatactaggaatttagatcatacg 6149 Query: 196 aagattataaaagtggaagaatatactaggtttgaaaaagacgggaatagcactcaggtg 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6148 aagattataaaagtggaagaatatactaggtttgaaaaagacgggaatagcactcaggtg 6089 Query: 256 aaatccatggtcaagttcagtagtggatttgggattgggattagaaacagaatcgagagc 315 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6088 aaatccatggtcaagttcagtagtggatttgggattgggattagaaacagaatcgagagc 6029 Query: 316 tggtcacatagcaagttcgatgagaatattcagaagagcaggaagggcatgactttcgtt 375 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6028 tggtcacatagcaagttcgatgagaatattcagaagagcaggaagggcatgactttcgtt 5969 Query: 376 ttgcaaagactggatctctcgttaaacaaaacttcgagctgaaaacggtttatttggcct 435 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5968 ttgcaaagactggatctctcgttaaacaaaacttcgagctgaaaacggtttatttggcct 5909 Query: 436 attctccttctgctttccagttatttatttgcatttactaccatacaagcatcgaacaac 495 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5908 attctccttctgctttccagttatttatttgcatttactaccatacaagcatcgaacaac 5849 Query: 496 aaacaatatatatactagagacatggactctcaatttacttcgtcgggtttatcttttaa 555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5848 aaacaatatatatactagagacatggactctcaatttacttcgtcgggtttatcttttaa 5789 Query: 556 ccttccaggacttttatttatatcacaagaagcagagcagatcaaccagtaaaaaaaatg 615 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5788 cctcccaggacttttatttatatcacaagaagcagagcagatcaaccagtaaaaaaaatg 5729 Query: 616 actagctaaacgttaatcacatatttatcaatataccagggcaagttccttgttagtatt 675 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5728 acgagctaaacgttaatcacatatttatcaatataccagggcaagttccttgttagtatt 5669 Query: 676 attttgatctccttattgtaaattgtcctctttgcttttgaaacttaaatcgtttattac 735 | ||||||||| ||||||||||| || || |||| |||||||| ||||||||||||||| Sbjct: 5668 a-tttgatctcattattgtaaatagt-ctacttgc-tttgaaac-taaatcgtttattac 5613 Query: 736 atattt 741 |||||| Sbjct: 5612 atattt 5607 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 22,485 Number of Sequences: 1807 Number of extensions: 22485 Number of successful extensions: 222 Number of sequences better than 1.0e-20: 1 length of query: 981 length of database: 10,358,551 effective HSP length: 16 effective length of query: 965 effective length of database: 10,329,639 effective search space: 9968101635 effective search space used: 9968101635 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)