BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZE11RM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1762 1291 0.0 >3x_Contig1762 Length = 22098 Score = 1291 bits (651), Expect = 0.0 Identities = 720/733 (98%), Gaps = 8/733 (1%) Strand = Plus / Plus Query: 45 gcttataactcca-ggtctaacccatgtcggtaggttcaaagagttgacttggccccaaa 103 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12566 gcttataactccaaggtctaacccatgtcggtaggttcaaagagttgacttggccccaaa 12625 Query: 104 gacgcgaaatggcgtttaatggcaacgtactgtaacagaaaaacagccagttattattga 163 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12626 gacgcgaaatggcgtttaatggcaacgtactgtaacagaaaaacagccagttattattga 12685 Query: 164 atattttaatacgatacttccccttcactttatcctgcgaatctccttccaccacatcgc 223 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12686 atattttaatacgatacttccccttcactttatcctgcgaatctccttccaccacatcgc 12745 Query: 224 cagattccgctacttttatcctttggtaatgctgatttatcaagtacgaactaatgatta 283 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12746 cagattccgctacttttatcctttggtaatgctgatttatcaagtacgaactaatgatta 12805 Query: 284 acgtaaaactagtcgcgacaacccacttcaccatgcgttttttcgaattctccggtctca 343 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12806 acgtaaaactagtcgcgacaacccacttcaccatgcgttttttcgaattctccggtctca 12865 Query: 344 caatgggacccgatgacataaacctctggctaagcaacatcttcgtcttatttttcaaat 403 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12866 caatgggacccgatgacataaacctctggctaagcaacatcttcgtcttatttttcaaat 12925 Query: 404 aaggacctgacacacgttgtggaacctgtggccacggaatccgcgacattgtcaacgata 463 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12926 aaggacctgacacacgttgtggaacctgtggccacggaatccgcgacattgtcaacgata 12985 Query: 464 cgttcctagatattccaatcattgcgagtatctaaccaccgacacaaaaattcaaaaaga 523 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12986 cgttcctagatattccaatcattgcgagtatctaaccaccgacacaaaaattcaaaaaga 13045 Query: 524 aaacagtcaaataattaccttttaccttgtaatcaccaaaaaacacaacacannacacaa 583 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 13046 aaacagtcaaataattaccttttaccttgtaatcaccaaaaaacacaacacaaaacacaa 13105 Query: 584 aacactaaccaacagcccttaggaaaacccactactaatacactgcaaactcttttctat 643 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 13106 aacactaaccaacag-ccttaggaaaaccaactactaatacactgcaaactcttttctat 13164 Query: 644 cttctagtaccacgctaaagacaattnttggcgcgctgctccaaattatctctctagaaa 703 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 13165 cttctagtaccacgctaaggacaatt-ttggcgcgctgctccaaattatctctctagaaa 13223 Query: 704 attcatgtgcccgatcttaaatacatttctctatacagggaaaaccttcttattctaaag 763 || |||||| ||||||||||||||| ||||||||||| |||||||| ||||||||||||| Sbjct: 13224 atccatgtg-ccgatcttaaataca-ttctctataca-ggaaaacc-tcttattctaaag 13279 Query: 764 actttttttatat 776 |||||||||||| Sbjct: 13280 -ctttttttatat 13291 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6483 Number of Sequences: 1807 Number of extensions: 6483 Number of successful extensions: 47 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)