BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZF06FM1.SCF screened BAC_end (997 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1572 815 0.0 >3x_Contig1572 Length = 12810 Score = 815 bits (411), Expect = 0.0 Identities = 486/505 (96%), Gaps = 7/505 (1%) Strand = Plus / Plus Query: 88 tattcataatctttaatttcatctcatcgcatctcatcgcactgaacttttttttcctcg 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8892 tattcataatctttaatttcatctcatcgcatctcatcgcactgaacttttttttcctcg 8951 Query: 148 ccaaaaaaattttctgtaacgaaaagaaacacttccagtcacgtgaactgtgaaaccaag 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8952 ccaaaaaaattttctgtaacgaaaagaaacacttccagtcacgtgaactgtgaaaccaag 9011 Query: 208 atcttctgtttgacactcagacaagtagatgatcaattacaattacaattacaagctgac 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9012 atcttctgtttgacactcagacaagtagatgatcaattacaattacaattacaagctgac 9071 Query: 268 ctcgaatagggtactggcaagttggcgtttacctgggatgatctgttgctgcagcatggt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9072 ctcgaatagggtactggcaagttggcgtttacctgggatgatctgttgctgcagcatggt 9131 Query: 328 gtaccccagcaagattctttagaattaaatgggaacatttcggaaagttacccaaagaat 387 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct: 9132 gtaccccagcaagattcttcacaattaaatgggaacatttcggaaagttacccaaagaat 9191 Query: 388 gggaagcaagttaaatagtcaaatagtcaaattgtgactgtctatatgtgaatcgtatat 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9192 gggaagcaagttaaatagtcaaatagtcaaattgtgactgtctatatgtgaatcgtatat 9251 Query: 448 acagagaccaattttaaagcagtttcccctatttacctgctggaggaaactagcactttt 507 |||||||| |||||| |||||||||||||||| ||||||||| ||| ||||||||||| | Sbjct: 9252 acagagacgaattttcaagcagtttcccctatctacctgctgcagg-aactagcacttct 9310 Query: 508 aacccggcagtaaaggttttccgtattagcttatgaaatcgttttatcttgggttttttg 567 || ||||||||||| ||||||||||| |||| ||||||||||| |||||||| ||||| Sbjct: 9311 aa-ccggcagtaaa-gttttccgtatcagctcatgaaatcgttatatcttgg--cttttg 9366 Query: 568 acactgggcttttcgaggtggcttt 592 ||||||| ||||||||||||||| Sbjct: 9367 acactgg--ctttcgaggtggcttt 9389 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 24,713 Number of Sequences: 1807 Number of extensions: 24713 Number of successful extensions: 556 Number of sequences better than 1.0e-20: 1 length of query: 997 length of database: 10,358,551 effective HSP length: 16 effective length of query: 981 effective length of database: 10,329,639 effective search space: 10133375859 effective search space used: 10133375859 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)