BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZF08RM1.SCF screened BAC_end (972 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig640 1201 0.0 >3x_Contig640 Length = 3164 Score = 1201 bits (606), Expect = 0.0 Identities = 651/662 (98%), Gaps = 3/662 (0%) Strand = Plus / Plus Query: 48 tattagacttcttaaaagacatgaaaattcctgttatgtctgtcggattaggtcctgttt 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1154 tattagacttcttaaaagacatgaaaattcctgttatgtctgtcggattaggtcctgttt 1213 Query: 108 acaagcgtgatataatgaaggcttgtactatgttagaaaaagctcctgaattagcggtta 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1214 acaagcgtgatataatgaaggcttgtactatgttagaaaaagctcctgaattagcggtta 1273 Query: 168 tgctatgctttgatgtcaaggttgataaggaagcagaacaatatgctgcttaacaacata 227 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1274 tgctatgctttgatgtcaaggttgataaggaagcagaacaatatgctgcagaacaacata 1333 Query: 228 tcaaaattttcaatgctgatattatttaccatttattcgatgccttcacagcctaccaga 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1334 tcaaaattttcaatgctgatattatttaccatttattcgatgccttcacagcctaccaga 1393 Query: 288 aggaactacttgaaaagcgtcgtgctgagtttatcggtgacgctaccttcccatgcgtcc 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aggaactacttgaaaagcgtcgtgctgagtttatcggtgacgctaccttcccatgcgtcc 1453 Query: 348 tgaacactctacaaatcattaacaagcgtggccctatgatcattggtgtggatgtcattg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1454 tgaacactctacaaatcattaacaagcgtggccctatgatcattggtgtggatgtcattg 1513 Query: 408 aaggttcattgaagatcggtactcctatctgtgcagtgaaatatgacccagcaacaaagg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1514 aaggttcattgaagatcggtactcctatctgtgcagtgaaatatgacccagcaacaaagg 1573 Query: 468 agagaataacattgttgcttggtagagtcacttccttggaaatcaatcaccaatctgtga 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1574 agagaataacattgttgcttggtagagtcacttccttggaaatcaatcaccaatctgtga 1633 Query: 528 ctgaagtcaagaagggtcaaaccaatgcaggtgttgcaatgcgtttagaagatccttccg 587 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1634 ctgaagtcaagaagggtcaaaccaatgcaggtgttgcaatgcgtttagaagatccttccg 1693 Query: 588 gtcagcaaccaatcttgggtcgtcatgttgatgaaaaagatacatttgattctcacatca 647 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1694 gtcagcaaccaatctggggtcgtcatgttgatgaaaaagatacattgtattctcacatca 1753 Query: 648 ctagaaaggccattgattcattgaaaggatcctgcttttcagagatcaagtttccaaaat 707 |||||| | |||||||| |||||||| |||||||| |||||||||||||| ||||||||| Sbjct: 1754 ctagaaggtccattgatacattgaaa-gatcctgc-tttcagagatcaag-ttccaaaat 1810 Query: 708 ct 709 || Sbjct: 1811 ct 1812 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7943 Number of Sequences: 1807 Number of extensions: 7943 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 972 length of database: 10,358,551 effective HSP length: 16 effective length of query: 956 effective length of database: 10,329,639 effective search space: 9875134884 effective search space used: 9875134884 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)