BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC3ZF12RM1.SCF screened BAC_end (1006 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1351 948 0.0 >3x_Contig1351 Length = 9242 Score = 948 bits (478), Expect = 0.0 Identities = 524/538 (97%), Gaps = 1/538 (0%) Strand = Plus / Minus Query: 75 cttgaagggaagacacccatggaggagttagaaagactttcagctgctagagtacccaaa 134 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8946 cttgaagggaagacacccatggaggagttagaaagactttcagctgctagagtacccaaa 8887 Query: 135 aagaaagatttcatggacccaatcgaatcaatgttgcaggcaaagaaaaatatcgaaact 194 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8886 aagaaagatttcatggacccaatcgaatcaatgttgcaggcaaagaaaaatatcgaaact 8827 Query: 195 gaagttgtaaatgaagctggtgattcaagacctacaatacctatattattggagaagatt 254 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8826 gaagttgtaaatgaagctggtgattcaagacctacaatacctatattattggagaagatt 8767 Query: 255 aaacattctagcatctataacgatcaaattaccaattcgtatatcataccagagagaata 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8766 aaacattctagcatctataacgatcaaattaccaattcgtatatcataccagagagaata 8707 Query: 315 gcgaaatatggtgaattagaatttgcactctctccggaagtttatcaggcgcttgagtat 374 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8706 gcgaaatatggtgaattagaatttgcactctctccggaagtttatcaggcgcttgagtat 8647 Query: 375 aaagacttctattctcaccaagctgcagcaataaactgcattcataagggagagaatgta 434 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8646 aaagacttctattctcaccaagctgcagcaataaactgcattcataagggagagaatgtc 8587 Query: 435 ataatcacaacgtctacttcgtcgggaaaatctttaatctaccagttatttgcaatagac 494 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 8586 ataatcacaacgtctacttcgtcgggaaaatctttaatctaccagttatctgcaatagac 8527 Query: 495 gcactacttaaggattcacactctacgttcatgtacatattttcgacaaaagcttttaca 554 |||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| || Sbjct: 8526 gcactactcaaggatccacactctacgttcatgtacatatttccgacaaaagctttagca 8467 Query: 555 caagatctaaagagattattttaaaagctattgttccaagaaaccacaattggcacat 612 ||||||| |||||||| |||| ||||||||||| ||||||| |||| ||||| ||||| Sbjct: 8466 caagatcaaaagagatcatttcaaaagctattg-tccaagataccagaattgtcacat 8410 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8227 Number of Sequences: 1807 Number of extensions: 8227 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 1006 length of database: 10,358,551 effective HSP length: 16 effective length of query: 990 effective length of database: 10,329,639 effective search space: 10226342610 effective search space used: 10226342610 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)